Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3941234	3941408	175	83 [0]	[0] 31	bcsG	predicted inner membrane protein

TCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTC  >  W3110S.gb/3941165‑3941233                                                                     | tCAATTCGCTCTGCATGCCGCCATTTTCGCTAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:727001/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:594643/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:658567/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:642561/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:638716/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:611876/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:602249/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:601593/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:601061/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:599039/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:714328/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:564348/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:543495/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:495696/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:487836/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:479322/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:457765/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:456663/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:440372/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:388656/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:777974/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:966363/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:936634/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:916512/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:888292/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:880315/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:863926/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:857796/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:855879/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:80298/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:714196/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:760980/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:758822/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:744812/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:739656/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:731811/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:727736/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:71769/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1036041/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1360671/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1131080/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1474738/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1463280/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1442072/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:143177/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1418761/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1152136/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:140460/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1097181/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1329704/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1181824/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1300389/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1197544/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1263886/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1236885/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1200916/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1540522/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1592629/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:181921/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:205415/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1054902/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1049467/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:239151/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:248330/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:266078/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:325064/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1004589/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:344995/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:345898/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:348200/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:369483/69‑1 (MQ=255) tCAATTCGCTCTGCATGCCGCCATTTTCGCCAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:404853/69‑1 (MQ=255) tCAATTCGCGCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:465456/69‑1 (MQ=255)  cAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:746207/68‑1 (MQ=255)  cAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1061514/68‑1 (MQ=255)   aaTTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1416063/67‑1 (MQ=255)   aaTTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:228413/67‑1 (MQ=255)   aaTTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGGTATGTc  <  1:968490/67‑1 (MQ=255)      tCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1539611/64‑1 (MQ=255)              cATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:882738/56‑1 (MQ=255)                 gccgccATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:236495/53‑1 (MQ=255)                  ccgccATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:607564/52‑1 (MQ=255)                       aTTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTc  <  1:1303931/47‑1 (MQ=255)                                                                     | TCAATTCGCTCTGCATGCCGCCATTTTCGCGAACTTCTTTCAAAAAACCGCCGAACTGGCCGTTATGTC  >  W3110S.gb/3941165‑3941233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑