Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3965488	3965513	26	54 [0]	[0] 79	yhjE	predicted transporter

GGCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGAAA  >  W3110S.gb/3965419‑3965487                                                                     | ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGATGAAGATATGCGGaaa  <  1:933481/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCTGaaa  <  1:451500/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:665090/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:322359/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:348103/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:349745/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:373291/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:3893/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:394047/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:408356/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:435799/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:533044/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:571049/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:622760/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1029043/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:670377/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:712476/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:716223/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:774470/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:817470/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:818023/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:925678/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:933060/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:963572/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:972730/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:987117/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1387904/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:101722/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1042186/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1113944/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1116982/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1131484/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:128236/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1304056/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1311903/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1316716/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1328465/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1356757/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1357019/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:315035/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1469723/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1477172/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1499150/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:152648/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1534281/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:1543261/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:165336/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:197293/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:258862/69‑1 (MQ=255) ggCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:304934/69‑1 (MQ=255)  gCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:782117/68‑1 (MQ=255)  gCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:338376/68‑1 (MQ=255)     aaGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:656005/65‑1 (MQ=255)         tGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGaaa  <  1:180316/61‑1 (MQ=255)                                                                     | GGCGAAGGTGGCGAGCGACTGTAGCGTTGCTGCCGTAGGATCGCCCTGCGGGAAGAAGATATGCGGAAA  >  W3110S.gb/3965419‑3965487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑