Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4082040	4082153	114	72 [0]	[0] 150	[rtcR]	[rtcR]

TTTAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGA  >  W3110S.gb/4081971‑4082039                                                                     | ttttAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:476949/1‑69 (MQ=255) tttAATCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1554767/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGCGCGGGCGTCGTGCACCAATTCCAGTCGATCGATGACCAACGa  >  1:925701/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCTACAATTCCAGTCGATCGATGACCAACGa  >  1:980427/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACACTTCCAGTCGATCGATGACCAACGa  >  1:1327862/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAATGa  >  1:679817/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:610951/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:292192/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:587378/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:582147/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:48343/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:446104/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:443167/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:415604/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:400781/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:39171/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:379793/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:361445/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:351819/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:343978/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:291009/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:626251/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:65666/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:668139/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:713811/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:748239/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:748387/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:77697/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:780393/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:791590/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:811080/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:813603/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:825141/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:827764/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:863264/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:938882/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:948210/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1241523/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1349370/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1337023/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1331588/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1302580/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1290367/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1265189/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:126497/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1258136/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1354907/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1230763/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1230316/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1074710/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1072234/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1068101/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1067352/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1014346/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:198050/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:282547/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:278554/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:25794/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:244672/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:223263/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:212403/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:204406/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1008972/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:163815/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1548874/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1502505/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1497775/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1495939/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1461699/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1435548/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:1387461/1‑69 (MQ=255) tttAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCCTGCAACAATTCCAGTCGATCGATGACCAACGa  >  1:893772/1‑69 (MQ=255)                                                                     | TTTAAGCGTTTCAAATAGCGAGCGCGAGCGGGCGTCGTGCAACAATTCCAGTCGATCGATGACCAACGA  >  W3110S.gb/4081971‑4082039

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑