Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4140880	4140984	105	58 [0]	[0] 14	[yhfL]	[yhfL]

GGACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGC  >  W3110S.gb/4140816‑4140879                                                                | ggcccGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:612333/4‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:613793/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:339782/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:343866/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:363135/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:409231/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:411244/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:431578/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:443176/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:450302/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:484244/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:521350/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:554378/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:571860/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:597386/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:326809/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:64740/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:658399/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:687146/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:710262/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:718037/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:738786/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:755982/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:788558/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:789876/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:816551/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:847200/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:867403/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:989028/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1487797/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1078588/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1099680/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1153945/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1173052/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1204475/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1215898/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1232751/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1289407/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1316522/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1376713/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1396538/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1422783/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1447103/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1457633/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1015790/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1491309/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1499499/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1549468/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:1550091/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:189589/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:210357/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:222258/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:235613/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:245356/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:261318/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:263263/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGc  >  1:280071/1‑64 (MQ=255) ggACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGAAGCAGGTAGTCGTAAGAGc  >  1:210031/1‑64 (MQ=255)                                                                | GGACCGCAACCGCCAATGATTTTAGAAATAGAAATTGCCGGGTGCAGCAGGTAGTCGTAAGAGC  >  W3110S.gb/4140816‑4140879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑