Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4144105	4144138	34	63 [0]	[0] 36	nirB	nitrite reductase, large subunit, NAD(P)H‑binding

GCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATG  >  W3110S.gb/4144049‑4144104                                                        | gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCTTCAATg  <  1:1497980/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCGATg  <  1:300624/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:627302/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1016231/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:217028/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:257697/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:290806/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:324222/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:36755/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:402693/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:428742/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:483374/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:495995/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:502107/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:547704/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:211639/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:628458/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:644859/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:704129/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:758167/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:782346/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:85297/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:901483/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:934582/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:936419/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:943336/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:956707/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:95960/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:969574/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:995880/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1433910/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:103132/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1086856/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:113130/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1216674/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1243185/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1247935/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1284894/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1287226/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1318189/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1391837/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1414357/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1416904/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1429831/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:16361/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:162296/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:16126/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1590300/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1588623/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1567837/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1565501/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1455126/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1563501/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1544197/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1533225/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1533143/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:153313/56‑1 (MQ=255) gCAGGCGCGCCATCTCTTCTTCCAGATGAGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:242417/56‑1 (MQ=255)  cAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:833145/55‑1 (MQ=255)  cAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:1055702/55‑1 (MQ=255)         gcCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:17843/48‑1 (MQ=255)            aTCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:842705/45‑1 (MQ=255)                 ttcttcCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATg  <  1:606830/40‑1 (MQ=255)                                                        | GCAGGCGCGCCATCTCTTCTTCCAGATGTGCGTTCAGCCCCAGTTTGTCGTCAATG  >  W3110S.gb/4144049‑4144104

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑