Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4153358	4154066	709	53 [0]	[0] 30	[yhfK]–[crp]	[yhfK],[crp]

CAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAC  >  W3110S.gb/4154067‑4154129 |                                                               cAAACAGGCCCAGTTCGCCAATAAAATCACCTTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1090130/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGGTCATTTCTTTAc  >  1:366699/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTaa  >  1:695306/1‑62 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:171679/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:911041/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:902686/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:83776/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:787892/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:647698/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:638368/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:599492/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:531223/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:331180/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:304765/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:217900/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1017367/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1607272/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:159942/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1562293/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1535886/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1490589/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1487190/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1366033/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1258030/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1256330/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1235978/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1115247/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:1108817/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:107391/1‑63 (MQ=255) cAAACAGGCCCAGTTCGCCAATAAAATCACCCGGATTCAGATAGGAGAGGATCATTTCTTTAc  >  1:554759/1‑63 (MQ=255) |                                                               CAAACAGGCCCAGTTCGCCAATAAAATCACCCTGATTCAGATAGGAGAGGATCATTTCTTTAC  >  W3110S.gb/4154067‑4154129

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑