Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4249968	4250142	175	40 [0]	[0] 58	[malE]	[malE]

ATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCT  >  W3110S.gb/4250143‑4250211 |                                                                     aTTGGCGGTAGTGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:831682/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCTCCACGATTTTTGCAAGCAACATCACGACATTCCt  <  1:208468/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGTTTTTTGCAAGCAACATCACGAAATTCCt  <  1:650074/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTTCAAGCAACATCACGAAATTCCt  <  1:370586/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAAGATCACGAAATTCCt  <  1:1162437/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:490605/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:612720/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:608482/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:596861/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:514378/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:507173/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:497130/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:361425/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:480807/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:45410/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:375049/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:338120/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:620525/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:650273/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:665401/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:670544/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:686355/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:687388/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:762457/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:772681/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:853305/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:888505/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:903139/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:949039/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:965283/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1375547/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1017606/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1032118/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1074363/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1094868/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1096087/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1100725/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1121026/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1131746/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1167545/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1287419/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1289596/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1310082/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1365271/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:355939/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1447673/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1460502/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1488970/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1546270/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1550228/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1558604/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1585126/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:181407/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:224251/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:236109/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:275410/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:288529/69‑1 (MQ=255) aTTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCt  <  1:1016543/69‑1 (MQ=255) |                                                                     ATTGGCGGTAATGTGGAGATGCGCACATAAAATCGCCACGATTTTTGCAAGCAACATCACGAAATTCCT  >  W3110S.gb/4250143‑4250211

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑