Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4522414	4522505	92	53 [0]	[0] 95	fecI	RNA polymerase, sigma 19 factor

TCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTG  >  W3110S.gb/4522506‑4522573 |                                                                    tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGGATGCTg  <  1:55292/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:405614/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:576000/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:55934/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:549784/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:54144/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:519799/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:519564/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:463503/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:462447/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:422820/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:411691/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:613161/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:369101/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:366563/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:354416/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:324451/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:276699/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:272729/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:261692/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:232506/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:214499/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:188969/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:178921/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:727726/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:994881/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:99222/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:988455/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:927804/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:880908/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:838231/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:820018/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:815815/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:811925/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:785207/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:765406/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:168249/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:716230/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:710063/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:685765/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:683492/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:680117/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:678854/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:673158/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:656095/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:649835/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:642626/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1154171/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1271519/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:126969/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1269628/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:126251/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1260399/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1231252/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1231122/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1205834/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1180051/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1178819/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1165745/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:161029/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1145359/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1142038/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1119279/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1116193/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1115165/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1094417/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1076109/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1074763/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1037781/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1028660/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1490359/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1027991/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1603072/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1602955/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1593403/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1585038/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1583448/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1562649/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:156151/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1556794/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:155482/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1500618/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1492448/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1305040/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1471504/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:146145/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1449521/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1416204/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1374511/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1368872/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1335348/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1323825/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1308730/68‑1 (MQ=255) tCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCACGCTg  <  1:581220/68‑1 (MQ=255) tCAGACCATCCAGTAGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTg  <  1:1185149/68‑1 (MQ=255) |                                                                    TCAGACCATCCAGTTGCGAAAGCAGAAACGCTTCACGTGTTTTGCCGTTTAGCCCGTCCAGCATGCTG  >  W3110S.gb/4522506‑4522573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑