Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	4576931	4577006	76	20 [0]	[0] 73	yjiS/yjiT	conserved hypothetical protein/conserved hypothetical protein

TAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCT  >  W3110S.gb/4577007‑4577074 |                                                                    tAACTATACAATATTCTGAAAGGTTTTCTTTCATATTAGAAATGTTTTGGGGTTTTGTTTTTGTATCt  <  1:1411083/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:457111/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:63298/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:615364/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:613609/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:613527/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:610739/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:543660/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:500831/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:486064/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:635152/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:452954/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:443410/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:419815/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:416186/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:398204/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:380062/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:379638/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:34974/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:792421/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:973722/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:926713/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:88880/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:88820/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:880596/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:8737/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:863974/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:826540/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:316482/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:7905/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:775322/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:764752/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:720245/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:702053/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:646891/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:639677/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:637216/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1157066/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:317054/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1231120/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1228487/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1219148/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1203954/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1201569/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1176465/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1171913/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1251975/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1150823/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1141328/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1131755/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1131492/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1112137/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1097734/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1093867/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1556127/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1083885/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:311952/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:286830/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:259637/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:238536/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:221722/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:210330/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1569935/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1260916/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1517419/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1503777/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1424156/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1395237/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1370950/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1349619/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCt  <  1:1312302/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGGTTTGTTTTTGTATCt  <  1:1103507/68‑1 (MQ=255) tAACTATACAATATTCTGAAAGGTTTGCTTTCAAATTAGAAATGTTGGGGGGTTTTGTTTTTGTATCt  <  1:1249208/68‑1 (MQ=255) |                                                                    TAACTATACAATATTCTGAAAGGTTTTCTTTCAAATTAGAAATGTTGTGGGGTTTTGTTTTTGTATCT  >  W3110S.gb/4577007‑4577074

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑