Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	472303	472558	256	170 [0]	[0] 81	amtB	ammonium transporter

GCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGC  >  W3110S.gb/472559‑472627 |                                                                     gCGTTTCAGGGATCGTTTGCCTGCATTGCCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:644755/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCgg                                    >  1:336257/1‑35 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCgg                                    >  1:365048/1‑35 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGc                                   >  1:287216/1‑36 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCtt                                 >  1:812339/1‑38 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTg                                >  1:1301964/1‑39 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATa                             >  1:630595/1‑42 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTgggg                      >  1:786613/1‑49 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCt                  >  1:1058978/1‑53 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATcc    >  1:1516893/1‑67 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATcc    >  1:946606/1‑67 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATc     >  1:1224474/1‑66 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:54179/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:989938/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:514105/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:506515/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:493576/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:484420/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:440642/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:389190/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:316905/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:309148/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:296337/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:912028/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:563028/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:577781/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:59588/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:633970/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:924101/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:653007/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:661305/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:662716/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:670672/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:739858/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:762427/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:783208/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:789606/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:831630/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:893621/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1488617/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1246862/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1270684/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1278290/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1285078/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1303779/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1309804/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1381217/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1386093/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1392135/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1406042/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1406365/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:142424/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:144079/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1465305/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1511902/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:108071/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1558436/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:156652/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1074479/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1069822/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:194901/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:207261/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:1066458/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:223639/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCg   >  1:243850/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:1046467/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:942265/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:959907/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:84746/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:280486/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:819266/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:1262558/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:1524266/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:409031/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:227032/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:275857/1‑69 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACCAATCCg   >  1:368394/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCCCt                  >  1:830716/1‑53 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCCCTGGCGGAACGAATCCg   >  1:1591720/1‑68 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCATGATAGATggg                       >  1:476871/1‑48 (MQ=255) gCGTTTCAGGGATCGTTTGCCTGCAATACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGc  >  1:1118278/1‑69 (MQ=255) |                                                                     GCGTTTCAGGGATCGTTTGCCTGCATTACCGTCGGCTTGATAGTTGGGGCGCTGGCGGAACGAATCCGC  >  W3110S.gb/472559‑472627

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑