Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1131285	1131342	58	33 [0]	[0] 15	flgN	export chaperone for FlgK and FlgL

TCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAT  >  W3110S.gb/1131340‑1131407    |                                                                 gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGTATCTCTGCAAGACGTGTCAt  <  1:705847/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:1266107/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:1300153/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:1446569/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:1498779/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:1542217/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:1594270/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:324118/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:443946/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:457864/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:623133/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:641010/65‑1 (MQ=255) gataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:777564/65‑1 (MQ=255)  ataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:549779/65‑1 (MQ=255)  ataTTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAt  <  1:770347/65‑1 (MQ=255)    |                                                                 TCCATTACCGTTTTGAGATCGTTAAGCACAGCGGACATCTGGTCGAGGATCTCTGCAAGACGTGTCAT  >  W3110S.gb/1131340‑1131407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑