Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1540661	1541422	762	175 [0]	[0] 55	narZ	nitrate reductase 2 (NRZ), alpha subunit

TCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGCC  >  W3110S.gb/1541423‑1541491 |                                                                     tCCGGTGCCAGTGCCAGAATCACTTCTGAATCGTCAATGGCGGTGTCAATCAGAGGACGCCCCTGTGcc  >  1:1238386/1‑69 (MQ=39) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAGTCAGCGGACGCCCCTGTGcc  >  1:1306287/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCtgtg    >  1:826425/1‑67 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:689323/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:389181/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:411478/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:418880/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:435220/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:460761/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:500465/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:503713/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:531808/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:550583/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:572202/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:577322/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:585441/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:649013/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:384841/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:69706/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:698203/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:852316/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:875307/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:880210/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:897755/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:900594/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:921437/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:969536/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1418815/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1082901/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1141562/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1212031/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:122119/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1228098/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1246774/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1294438/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1307285/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:135838/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1373862/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1408869/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1047875/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1467189/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:14878/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1588864/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:1591964/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:196357/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:205897/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:222104/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:24752/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:248864/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:303622/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:328944/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGcc  >  1:36423/1‑69 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGc   >  1:655510/1‑68 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGc   >  1:532404/1‑68 (MQ=255) tCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGc   >  1:876728/1‑68 (MQ=255) |                                                                     TCCGGTGCCAGTGCCAGAATCACTTCTGAAGCGTCAATGGCGGTGTCAATCAGCGGACGCCCCTGTGCC  >  W3110S.gb/1541423‑1541491

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑