Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1797153	1798200	1048	64 [0]	[0] 57	[ihfA]–[pheT]	[ihfA],[pheT]

ACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTC  >  W3110S.gb/1798201‑1798269 |                                                                     aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:592014/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:329083/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:355561/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:35670/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:38038/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:402046/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:455875/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:462199/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:502022/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:514399/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:524835/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:532638/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:535650/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:558022/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:580660/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:309700/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:595715/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:603563/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:605173/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:60594/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:609109/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:630894/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:641533/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:685915/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:750540/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:896620/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:91556/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:92755/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:979933/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1466377/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1081265/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1098583/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1241873/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1285755/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1304999/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1322907/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1325511/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1364645/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1371143/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1394828/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1407376/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1420181/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1422324/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1024734/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1491222/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1491333/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:150301/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1518250/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1536687/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1545394/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1557993/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1578952/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:1607129/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:169431/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:272535/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:287875/69‑1 (MQ=255) aCCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGActtc  <  1:306352/69‑1 (MQ=255) |                                                                     ACCCATAATCAGGCTTGCCTGTACCGGCTCATCCGGGATGTTGTTGTAGCCGTAAACACGCGCGACTTC  >  W3110S.gb/1798201‑1798269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑