Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	1966837	1967197	361	21 [0]	[0] 47	flhB	predicted flagellar export pore protein

GTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGC  >  W3110S.gb/1967198‑1967265 |                                                                    gTCCCCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:693422/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGCACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:48857/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATc                                  >  1:338651/1‑36 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGCCATACGCAGCTTTTTCAGGTGGc  >  1:334266/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAg                >  1:1581503/1‑54 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCa        >  1:832583/1‑62 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTgg   >  1:1308474/1‑67 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTgg   >  1:1604796/1‑67 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:628403/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:506856/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:527019/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:53584/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:564051/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:611331/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:611567/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:624982/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:341332/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:629792/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:684370/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:689713/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:806897/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:874503/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:888183/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:900092/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:955647/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:432717/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1094814/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1168549/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1288354/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1352877/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:136520/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1370633/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1408710/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:143422/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1437109/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1489427/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:14945/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1535142/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1578622/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1586764/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:189841/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:245549/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:327496/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:1073234/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGc  >  1:451823/1‑68 (MQ=255) gTCACCTTCGCTTTGTTTGAACTCATCACGAATATACTGCCGt                           >  1:823787/1‑43 (MQ=255) gTCACCTTCGCTTTGGTTGAACTCATCACGATTATCCTGcc                             >  1:650747/1‑41 (MQ=38) |                                                                    GTCACCTTCGCTTTGTTTGAACTCATCACGAATATCCTGCCGTGACATACGCAGCTTTTTCAGGTGGC  >  W3110S.gb/1967198‑1967265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑