Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2007356	2007471	116	33 [0]	[10] 12	[fliD]–[fliS]	[fliD],[fliS]

CACAAATTGGCGTCGAAAGCGCCGTAATGAGCGCCAGCC  >  W3110S.gb/2007471‑2007509  |                                      cacaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:116088/39‑1 (MQ=255) cacaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:1214556/39‑1 (MQ=255) cacaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:131333/39‑1 (MQ=255) cacaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:1316479/39‑1 (MQ=255) cacaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:1400410/39‑1 (MQ=255) cacaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:1493479/39‑1 (MQ=255) cacaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:262311/39‑1 (MQ=255) cacaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:610053/39‑1 (MQ=255) cacaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:687216/39‑1 (MQ=255) cacaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:843677/39‑1 (MQ=255)  acaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:413900/38‑1 (MQ=255)  acaAATTGGCGTCGAAAGCGCCGTAATGAGCgccagcc  <  1:577414/38‑1 (MQ=255)  |                                      CACAAATTGGCGTCGAAAGCGCCGTAATGAGCGCCAGCC  >  W3110S.gb/2007471‑2007509

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑