Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2008298	2009636	1339	29 [0]	[0] 47	amyA	cytoplasmic alpha‑amylase

CTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCAA  >  W3110S.gb/2009637‑2009690 |                                                      cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGAt                    >  1:94132/1‑36 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTca               >  1:1567923/1‑40 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTc                >  1:147452/1‑40 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTgggg           >  1:1579633/1‑45 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTg              >  1:1181122/1‑42 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACTGGCaa  >  1:636185/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCgg     >  1:120929/1‑51 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:785469/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:330502/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:354118/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:378918/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:453548/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:481339/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:492777/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:559138/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:77802/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:283758/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:810283/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:832370/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:871873/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:888359/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:891079/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:914890/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:91579/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:94868/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1401219/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1033339/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1063616/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1064362/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1123708/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1171994/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1172226/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1213084/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1329785/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1334699/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1335400/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:322025/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1402787/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1418041/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1455408/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1478186/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:219271/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:1028668/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCaa  >  1:305742/1‑54 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCa   >  1:463019/1‑53 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCa   >  1:213330/1‑53 (MQ=255) cTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCa   >  1:359224/1‑53 (MQ=255) |                                                      CTGGGAGAGAATTACGGCAATAAAACCTGGCGTGATTTTCTGGGGAACCGGCAA  >  W3110S.gb/2009637‑2009690

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑