Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	161947	161948	2	17 [0]	[0] 91	ligT	2'‑5' RNA ligase

TGTGTGGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGT  >  W3110S.gb/161949‑162017 |                                                                     tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGAtt                                   >  1:930275/1‑36 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTc                                 >  1:523022/1‑38 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTg                               >  1:664782/1‑40 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGc                              >  1:269169/1‑41 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGAt                  >  1:793944/1‑53 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAg                >  1:1312866/1‑55 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCaa             >  1:304269/1‑58 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGAc    >  1:1464499/1‑67 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:494935/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:663275/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:658961/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:658330/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:595798/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:591785/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:589835/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:555998/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:499663/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:680386/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:482047/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:434323/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:414968/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:376295/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:348482/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:338996/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:30127/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:27717/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:773962/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:969397/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:963719/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:959308/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:939702/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:912606/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:883289/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:857748/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:843867/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:819057/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:792336/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:677267/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:747259/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:72942/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:719496/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:714443/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:711487/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:701455/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:692342/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:689547/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1006055/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1170462/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1412441/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1352644/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1343593/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1316332/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1305307/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1256297/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1241186/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1215267/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1180247/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1177388/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:261883/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1158251/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1148995/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1132868/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1108142/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:106104/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1058984/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1057921/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1024030/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:100295/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1426590/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:271830/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:259616/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:230559/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:22566/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:192373/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:189534/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:183822/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:171448/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:160214/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1600325/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1555719/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1545483/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1520037/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1499956/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:14940/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:149015/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1461411/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1453726/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGt  >  1:1419284/1‑69 (MQ=255) tgtgtgGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGAAAAGAAc        >  1:1257697/1‑63 (MQ=255) tgtgtgCCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATGGCAAAGAACAGACGt  >  1:206647/1‑69 (MQ=255) tgtgagGCGCGCCAATGGATAATCTGTTCGCGGAt                                    >  1:990657/1‑35 (MQ=255) |                                                                     TGTGTGGCGCGCCAATGGATAATCTGTTCGCGGATTTCTGCAGGTAAGTCGATAGCAAAGAACAGACGT  >  W3110S.gb/161949‑162017

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑