Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2665963	2666205	243	60 [0]	[0] 60	hcaT	predicted 3‑phenylpropionic transporter

CACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGT  >  W3110S.gb/2666206‑2666272 |                                                                   caCCAGCATCAGCCACGCTACGTGCTCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:485447/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAagag               >  1:1392790/1‑54 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:51968/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:26234/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:279866/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:321171/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:332301/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:349310/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:391269/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:407601/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:442186/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:474995/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:483607/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:484311/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:509118/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:260160/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:60401/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:609185/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:643542/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:656563/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:659091/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:660738/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:74254/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:763539/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:793198/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:808567/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:843282/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:873647/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:928229/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:986597/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1243242/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1031771/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1035734/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1041357/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1044977/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1071173/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1109616/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1113160/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1126307/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1147258/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1148757/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1148878/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1177214/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1237556/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1030771/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1311927/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1332972/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:137201/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1442701/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1448918/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1533674/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1538155/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1540335/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1553973/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1558410/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1566976/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:157905/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:1605044/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGt  >  1:174130/1‑67 (MQ=255) caCCAGCATCAGCCACGCTACGTGCGCCACCGCCCAGAAGGCGAc                        >  1:638476/1‑45 (MQ=255) |                                                                   CACCAGCATCAGCCACGCTACGTGCGCCCCCGCCCAGAAGGCGACAGCAAAGAGAAGTGTCAGCAGT  >  W3110S.gb/2666206‑2666272

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑