Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	2706664	2706839	176	89 [0]	[0] 69	rseB	anti‑sigma factor

TGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGA  >  W3110S.gb/2706840‑2706889 |                                                  tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGt               >  1:1515370/1‑37 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATcgcgt  <  1:179009/50‑2 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATcgcg   >  1:944011/1‑49 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:363341/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:428761/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:427484/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:42567/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:41566/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  >  1:392973/1‑50 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:382041/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:381978/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:464570/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:323463/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:296321/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:186244/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:186173/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1581249/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1579472/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:679216/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:981873/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:894165/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:87853/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:861599/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:819297/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:783479/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:701936/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:6815/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:43231/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:633201/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:620990/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:593789/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:573313/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:559945/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  >  1:466408/1‑50 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1578850/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1139687/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1259246/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1228018/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1182990/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1175897/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1169162/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1165511/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  >  1:1157985/1‑50 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1149290/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1263978/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:11261/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  >  1:1108715/1‑50 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:109162/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1070947/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1045047/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  >  1:1014581/1‑50 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1010997/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1515964/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1571493/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1563459/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1555098/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1547500/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1539114/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1526859/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:152024/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:100776/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1475144/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1432105/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:140541/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1396864/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1320120/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1299020/50‑1 (MQ=255) tGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  <  1:1291444/50‑1 (MQ=255) tGACGTGAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGa  >  1:334/1‑50 (MQ=255) |                                                  TGACGTTAAAAGCAATCACGCGAAATTGTTCCAGCGTTTCACCATCGCGA  >  W3110S.gb/2706840‑2706889

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑