Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3108432	3108546	115	11 [0]	[0] 56	yqgA	predicted inner membrane protein

TTGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAT  >  W3110S.gb/3108547‑3108615 |                                                                     ttGCGCCAGCGGCCCCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:775823/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCgc                 >  1:175531/1‑53 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATcc              >  1:1000487/1‑57 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTa         >  1:928820/1‑62 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTaa   >  1:1313542/1‑68 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTaa   >  1:395472/1‑68 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTaa   >  1:1156857/1‑68 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTaa   >  1:10202/1‑68 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTaa   >  1:338888/1‑68 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:358813/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:361586/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:339011/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:39356/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:406430/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:417539/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:434921/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:455637/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:609353/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:494362/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:576880/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:200049/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:619129/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:644314/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:672212/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:709465/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:719814/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:764127/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:879239/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:894686/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:986505/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:993839/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1239410/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1002352/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1025097/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1042031/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1043172/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1047877/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1057354/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1062798/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1080129/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:108710/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1187894/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1219370/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1226563/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:251384/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1296214/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1402622/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1413633/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1464745/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1514791/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1529652/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:1556980/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:167504/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:184161/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:192742/1‑69 (MQ=255) ttGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAt  >  1:243363/1‑69 (MQ=255) |                                                                     TTGCGCCAGCGGCACCGGGATCTTCGGGGCGATGAACGAAGGGATGACCGGCGATCCGAGTATTTTAAT  >  W3110S.gb/3108547‑3108615

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑