Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3143738	3143846	109	53 [0]	[0] 67	[hybA]–[hybO]	[hybA],[hybO]

TTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCC  >  W3110S.gb/3143847‑3143915 |                                                                     ttCACGCACCGCCATCACGCTGACACCGGCAACGAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:599022/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACAGCGCCGAGCAAACCAATAGCGcc  <  1:128687/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:575347/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:679328/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:652304/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:649264/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:64283/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:618152/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:607244/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:680377/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:550965/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:543733/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:541019/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:531866/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:522289/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:519410/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:408493/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:334522/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:282857/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:681332/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:720061/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:736328/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:763446/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:802750/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:814491/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:83104/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:836085/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:84340/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:851275/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:883336/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:89071/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:907765/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:925345/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:939822/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1379159/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1023557/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1029153/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1030318/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1036838/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1047846/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:106605/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1118148/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1143538/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1179225/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:125697/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1264894/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1322244/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1328036/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1330816/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:133337/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1605468/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:101090/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:256421/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:248437/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:245050/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:243451/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:206442/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:200291/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:182099/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:300645/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1599220/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:159725/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1559073/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1528972/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1413175/69‑1 (MQ=255) ttCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCCCCGAGCAAACCAATAGCGcc  <  1:1463338/69‑1 (MQ=255) ttCACACACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGcc  <  1:1269077/69‑1 (MQ=255) |                                                                     TTCACGCACCGCCATCACGCTGACACCGGCAACCAACCCAACCACACCGCCGAGCAAACCAATAGCGCC  >  W3110S.gb/3143847‑3143915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑