Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3331908	3331976	69	105 [0]	[0] 55	yhbE	conserved inner membrane protein

AGAGGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGC  >  W3110S.gb/3331977‑3332045 |                                                                     agagGGAAGAGCGCTATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:697252/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:539732/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:187999/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:203215/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:310780/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:373792/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:397579/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:439266/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:475464/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:483608/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:502808/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:505248/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:512698/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:522241/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:528767/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:187574/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:581617/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:589402/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:757736/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:808780/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:811689/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:860160/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:888536/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:88913/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:895768/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:91472/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:933954/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:962068/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:132354/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1025199/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1029779/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1038524/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1081123/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1116654/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1147463/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1213351/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1228427/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1235512/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1280843/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1296993/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1298033/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1322956/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1012821/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1330216/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:134270/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1384867/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1390697/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:139721/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1397530/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1457494/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1465331/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1487448/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1532973/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:1533612/69‑1 (MQ=255) agagGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGc  <  1:16978/69‑1 (MQ=255) |                                                                     AGAGGGAAGAGCGCAATTGTACATAAAGTGTACAGTAAAAACAGGATCTGCGGTGAGGCCAGCCGACGC  >  W3110S.gb/3331977‑3332045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑