Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3628515	3628845	331	165 [0]	[9] 80	rhtC	threonine efflux system

GAGAGACAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGAA  >  W3110S.gb/3628843‑3628911    |                                                                  gagagaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1187470/69‑1 (MQ=255)  agagaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:914973/68‑1 (MQ=255)  agagaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1526508/68‑1 (MQ=255)  agagaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:370290/68‑1 (MQ=255)  agagaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1303804/68‑1 (MQ=255)  agacaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:661602/68‑1 (MQ=255)   gagaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:162529/67‑1 (MQ=255)   gagaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1013767/67‑1 (MQ=255)   gagaCAAAAAAGAAAACGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:360984/67‑1 (MQ=255)    agaCAAAAACGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:112206/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:470482/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:449872/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:476731/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:505093/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:505964/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:508038/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:557832/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:466707/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:464269/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:24896/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:386336/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:33640/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:335942/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:332102/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1573658/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:747919/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:991320/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:928607/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:83903/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:810831/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:779232/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:776227/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:775352/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:748075/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:62352/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:74570/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:736910/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:724327/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:708851/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:70820/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:705190/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:644534/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:636941/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1127080/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1365848/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1363809/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1320852/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1305508/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1247771/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1239483/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1149755/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1136045/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1368476/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:11216/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1110503/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1068154/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1033044/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1027471/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1019123/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1008690/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1008573/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1375645/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1002635/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1570868/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1569080/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:155379/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1534473/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1531596/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1529956/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1500983/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1499694/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1474671/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1466403/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1434464/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1415666/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1391945/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:22091/66‑1 (MQ=255)    agaCAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCAACATGGCGACGGTGAGaa  <  1:217006/66‑1 (MQ=255)    agaCAAAAAAGAAATCAGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:102966/66‑1 (MQ=255)    agaCAAAAAACAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGaa  <  1:1566536/66‑1 (MQ=255)    |                                                                  GAGAGACAAAAAAGAAATCGGGACCGGGGCTCATAAGCGCCACAATGTGCACCATGGCGACGGTGAGAA  >  W3110S.gb/3628843‑3628911

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑