Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	297300	297691	392	11 [10]	[0] 48	yagQ	conserved hypothetical protein

GCGCTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGT  >  W3110S.gb/297692‑297745 |                                                      gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAgccgc                    >  1:423492/1‑36 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACaa           >  1:621303/1‑45 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:296055/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:276598/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:332827/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:343724/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:362857/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:443970/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:453534/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:47480/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:545943/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:558742/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:58475/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:668980/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:692930/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:702273/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:762060/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:776223/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:805016/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:878803/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:882543/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:90178/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:922078/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:957176/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1552886/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1152480/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1195076/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1197286/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:12892/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1375714/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1457966/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1482321/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1484128/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1500375/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1504379/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1527223/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1026956/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1568206/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:157794/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1580057/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1598793/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:1603777/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:170833/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:214674/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:229277/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:250011/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:254556/1‑54 (MQ=255) gcgcTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGt  >  1:257472/1‑54 (MQ=255) |                                                      GCGCTTCAAAAGCGGCAGCGGCCTCCACGCAGCCGCCAGAGACAAAACCGCAGT  >  W3110S.gb/297692‑297745

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑