Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3731724	3731942	219	185 [0]	[1] 83	bglF	fused beta‑glucoside‑specific PTS enzyme IIABC components

CCTGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGCC  >  W3110S.gb/3731941‑3732010   |                                                                    ccTGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTgggcc   <  1:1187970/69‑3 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGGAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1212231/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:530533/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:584709/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:517377/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:493367/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:487661/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:471795/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:46620/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:464363/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:448824/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:442558/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:416052/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:411666/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:403168/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:385362/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:371971/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:370201/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:360008/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:35032/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:336342/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:321454/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:314858/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:852313/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:995607/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:990018/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:984504/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:920388/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:886448/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:871252/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:854304/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:854049/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:854048/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:576997/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:849747/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:826505/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:808797/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:774267/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:763948/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:752753/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:640648/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:609194/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:311078/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1247749/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1517047/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1501759/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1487107/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1404411/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1396982/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1351715/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:132982/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1274513/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1269890/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1517255/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:117559/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1162708/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1151497/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1148825/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1105792/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1061350/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1055801/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:105333/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1050712/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:164786/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1009913/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:296227/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:29443/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:237751/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:235297/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:221114/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:215451/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:20734/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:207137/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:312851/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1604990/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1601986/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1586572/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1575947/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1566568/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1553064/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1552235/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1524607/68‑1 (MQ=255)   tGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGcc  <  1:1518199/68‑1 (MQ=255)   |                                                                    CCTGCATTTGCGGGCGCGGTAATGGGCGGCTTCTGGCAAATCTTCGTCATGTTCGGACTGCACTGGGGCC  >  W3110S.gb/3731941‑3732010

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑