Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3942481	3942723	243	55 [0]	[0] 50	bcsE	conserved hypothetical protein

GCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAC  >  W3110S.gb/3942724‑3942780 |                                                         gCGACCCAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:577730/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCACCGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:434109/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCgg                    >  1:283587/1‑39 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGt                   >  1:875478/1‑40 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTAc                 >  1:215095/1‑42 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCaa   >  1:768571/1‑56 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCaa   >  1:1204907/1‑56 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCaa   >  1:519933/1‑56 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCaa   >  1:1415948/1‑56 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:929403/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:803868/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:23383/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:269002/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1029992/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:401535/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:402045/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:904496/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:504761/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:511189/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:515712/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:886560/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:604657/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:623519/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:633129/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:697741/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:747269/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1280328/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:105117/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1068181/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1112997/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1141901/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1151584/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1166068/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1178104/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1204463/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1212775/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1242772/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:228070/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1282261/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1305909/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:13444/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:138982/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1397670/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1407769/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1438100/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1479749/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:1582076/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:177826/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAc  >  1:190671/1‑57 (MQ=255) gCGACACAGCGTCAGGGCTTGTTCAAAGCGGATAcc                       >  1:78821/1‑36 (MQ=255) |                                                         GCGACACAGCGTCAGGGCTTGTTCAACGCGGATACCCGGTACCGGACGTAGGGCAAC  >  W3110S.gb/3942724‑3942780

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑