Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	W3110S.gb	3970405	3970743	339	191 [0]	[0] 38	treF	cytoplasmic trehalase

CATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAATTT  >  W3110S.gb/3970744‑3970812 |                                                                     cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGAtcatca                             >  1:1236755/1‑42 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCg                        >  1:21247/1‑47 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGt                       >  1:12686/1‑48 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGAt                 >  1:1563153/1‑54 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGtt          >  1:952777/1‑61 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:909444/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:352661/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:371024/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:403638/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:442980/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:445066/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:57894/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:762936/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:873295/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:341363/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:914360/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:93510/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:940015/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:951303/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:961797/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:981572/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:1392448/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:1053145/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:1168929/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:1195657/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:1271574/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:1332754/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:1343394/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:1343761/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:343430/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:1419964/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:146029/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:186401/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:240501/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:1016614/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:342570/1‑69 (MQ=255) cATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAt    >  1:115697/1‑67 (MQ=255) cATACGAGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAAttt  >  1:208595/1‑69 (MQ=255) |                                                                     CATACGGGTCCAGCTCATAGCAGAGATCGACTTCGATCATCAGTTCGTCTGGATTAGGGTTTTGAATTT  >  W3110S.gb/3970744‑3970812

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑