| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | W3110S.gb | 1,426,674 | T→C | D393D (GAT→GAC) | trkG → | potassium transporter subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | W3110S.gb | 1,426,674 | 0 | T | C | 99.0% | 374.1 / ‑6.3 | 102 | D393D (GAT→GAC) | trkG | potassium transporter subunit |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (0/101); minor base A (0/1); total (0/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 102 total aligned reads displayed.
AATCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGATCGTGTA > W3110S.gb/1426612‑1426680 | aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTATATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:612267/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGTAAGATAGTTACAGACCGTGTa < 1:86671/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACGGACCGTGTa < 1:16923/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:312632/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:543037/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:487806/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:435502/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:421552/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:409226/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:391708/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:38777/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:374928/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:355473/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:35531/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:335483/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:587527/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:300822/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:297364/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:293442/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:293247/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:291812/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:282803/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:239029/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:234409/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1003735/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:834728/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:993625/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:988074/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:984583/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:967167/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:965896/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:957714/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:914571/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:878460/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:859107/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:854123/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:844829/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:576981/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:832846/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:824380/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:797471/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:732547/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:714778/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:665946/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:65913/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:621473/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:620290/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:230371/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1085341/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1397679/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1391911/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1367393/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1077878/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1364899/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1335905/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1305219/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1295072/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1282520/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1253917/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1066012/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1236368/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:123070/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1094683/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1193300/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1186133/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1178463/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1140295/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1135721/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1124699/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:11094/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1529218/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1004540/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:191364/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:160109/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1579876/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1578768/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1570983/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1568946/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1563829/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1534347/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1030327/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1523373/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1508419/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1507042/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:150050/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1479761/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1038155/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1453134/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1435685/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGAAAGATAGTTACAGACCGTGTa < 1:1478746/69‑1 (MQ=255)aaTCAGCTTTCTCATCCCAGAGCGTTGTCGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1522738/69‑1 (MQ=255)aaTCAGCTTTCTCATCCAAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGAACGTGTa < 1:207/69‑1 (MQ=255) aTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1532122/68‑1 (MQ=255) aTCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:201081/68‑1 (MQ=255) tgaGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:467773/65‑1 (MQ=255) cAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:391779/66‑1 (MQ=255) ttCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:585127/61‑1 (MQ=255) ccAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:918970/53‑1 (MQ=255) gtAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1198415/36‑1 (MQ=255) gtAAATGTAGGAGGGAAGATAGTTACAGACCGTGTa < 1:1238261/36‑1 (MQ=255) | AATCAGCTTTCTCATCCCAGAGCGTTGTTGAGTGTAAATGTAGGAGGGAAGATAGTTACAGATCGTGTA > W3110S.gb/1426612‑1426680 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |