New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	W3110S.gb	= 1499913	59 (1.280)	21 (0.580) +ATATCACCAG	10/76	NT	31.0%	coding (1314/1626 nt)	mdoD	glucan biosynthesis protein, periplasmic
	?	W3110S.gb	1787483 =	59 (1.280)					coding (1344/2379 nt)	pps	phosphoenolpyruvate synthase

CAGGTGAACACTATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1499897‑1499913 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCACCGTCTTTCAT  >  W3110S.gb/1787483‑1787497                  ||||||||||                agGGTGAACACTATCCCATATCACCAGCTCACCGTCTTTC    >  1:4190399/3‑40   GGTGAACACTATCCCATATCACCAGCTCACCGTCTTT     >  1:2173681/1‑37    GTGAACACTATCCCATATCACCAGCTCACCGTCTTTCA   >  1:1665245/1‑38    GTGAACACTATCCCATATCACCAGCTCACCGTCTTT     <  1:4459255/36‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTTCAT  >  1:895203/1‑38     TGAACACTATCCCATATCACCAGCTCACCGTCTTTCAT  <  1:3336082/38‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTTCA   <  1:2456053/37‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTTC    <  1:243541/36‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTTC    <  1:1047983/36‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTTC    <  1:327630/36‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTTC    <  1:1730825/36‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTT     <  1:2643940/35‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTT     <  1:293458/35‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTT     <  1:3777656/35‑1     TGAACACTATCCCATATCACCAGCTCACCGTCTTT     <  1:447429/35‑1      GAACACTATCCCATATCACCAGCTCACCGTCTTTCAT  <  1:1506292/37‑1      GAACACTATCCCATATCACCAGCTCACCGTCTTTCA   >  1:3178694/1‑36      GAACACTATCCCATATCACCAGCTCACCGTCTTTCA   >  1:4065892/1‑36       AACACTATCCCATATCACCAGCTCACCGTCTTTCAT  >  1:4296378/1‑36       AACACTATCCCATATCACCAGCTCACCGTCTTTCA   >  1:520217/1‑35        ACACTATCCCATATCACCAGCTCACCGTCTTTCAT  >  1:1218245/1‑35                  ||||||||||                CAGGTGAACACTATCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  W3110S.gb/1499897‑1499913 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTCACCGTCTTTCAT  >  W3110S.gb/1787483‑1787497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.