| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | W3110S.gb | 3,746,913 | Δ1,199 bp | 100% | [tnaB]–[tnaB] | [tnaB], insH, [tnaB] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 3746913–3748110 | 3748111 | 2–1199 | 78 [0] | [0] 78 | [tnaB]–[tnaB] | [tnaB],insH,[tnaB] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3746912 | 0 (0.000) | 50 (1.190) | 35/88 | NT | 100% | coding (71/447 nt) | tnaB | tryptophan transporter of low affinity |
| ? | W3110S.gb | 3748112 = | 0 (0.000) | coding (871/984 nt) | tnaB | tryptophan transporter of low affinity | |||||
TAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3746841‑3746912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATC > W3110S.gb/3748112‑3748181 TAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:2453570/1‑69 AAACAGGTCCGCCAGATAATCGAACAACCCCAGCTTGACACCAAAGAACGAACTGGCAACAGCTAAGTTA < 1:1565688/70‑1 AAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTA < 1:217163/70‑1 AAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:4412699/1‑68 AAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:2122224/1‑68 AAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGT > 1:4511316/1‑68 CAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG > 1:851909/1‑70 GGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAAC < 1:2619287/71‑1 TCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAC < 1:553059/71‑1 CGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACC < 1:1600828/70‑1 CCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAG > 1:3612909/1‑70 AATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAG < 1:2283681/67‑1 ATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGC < 1:3971908/64‑1 TCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:4382756/69‑1 TCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAG < 1:2526620/62‑1 CGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAAC > 1:2653352/1‑71 CAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGA > 1:3986667/1‑71 CAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGA > 1:3733973/1‑71 CAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGA < 1:3659248/71‑1 AACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGG < 1:2668932/60‑1 AACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:569412/48‑1 CCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAA > 1:2073179/1‑71 CCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:1643446/69‑1 CCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:1030901/1‑48 CCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:3637313/45‑1 CCCAGCGTAACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:2448123/45‑1 CAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGC > 1:2716145/1‑71 CAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATA > 1:449426/1‑67 CAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:4489598/1‑45 CAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:4006904/1‑45 CAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:3889882/43‑1 AGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCC > 1:2495058/1‑71 GCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCA < 1:3598652/51‑1 GCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:1885505/41‑1 GTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACAGCAGCAGGCAAAACTCGAT < 1:3723651/62‑1 GTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTG > 1:1184192/1‑71 GTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAA < 1:497461/54‑1 GTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:4384783/1‑41 GTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:3393791/1‑41 TGACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGC > 1:4230158/1‑71 GACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAA > 1:1142389/1‑54 GACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:1766717/37‑1 GACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:1938318/37‑1 GACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAG < 1:4110477/37‑1 ACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAA > 1:1677015/1‑61 ACACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCA > 1:4330684/1‑46 ACACCAAAGAACGAACTGGAAACAGCTAAGTTAGAG < 1:108650/36‑1 CACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCA < 1:1374296/42‑1 CACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAA > 1:3387360/1‑37 ACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTC < 1:2876403/54‑1 ACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTC < 1:677836/54‑1 ACCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTC < 1:4521199/54‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGAT < 1:4461154/56‑1 CCAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGC > 1:2334294/1‑42 CAAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTG > 1:3255928/1‑71 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:3414510/1‑71 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGG > 1:3869495/1‑71 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAG > 1:549536/1‑42 AAAGAACGAACTGGCAACAGCTAAGTTAGAGAACA‑CAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGT < 1:1054897/71‑1 AAGAACGTACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGT < 1:1861022/71‑1 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAAT < 1:1767908/55‑1 AGAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAAT < 1:1783972/55‑1 GAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGC > 1:3595134/1‑71 GAACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGC > 1:3319613/1‑71 GAACGAACTGGCAACAGCTAAGTTACAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGT > 1:652300/1‑64 AACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCC < 1:3971404/71‑1 AACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCA < 1:4588743/41‑1 ACGAACTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAAC > 1:2103290/1‑44 CTGGCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTC < 1:802578/41‑1 GCAACAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGC > 1:3568116/1‑46 CAGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCCTGCTGTTTGGTGCCGAGGAACGATTTC < 1:16634/71‑1 AGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCA > 1:4070454/1‑71 AGCTAAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGC < 1:2826681/41‑1 AAGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCA > 1:2184767/1‑70 AGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGC > 1:3147331/1‑71 AGTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGT < 1:1655053/49‑1 GTTAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTT < 1:3235621/45‑1 TAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGA > 1:2609659/1‑58 TAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGA > 1:1646418/1‑58 TAGAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGT < 1:3306950/41‑1 GAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGATGAACGATTTCACCAGCGAATC < 1:3972233/71‑1 GAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATC < 1:1747588/71‑1 GAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAAT < 1:4121711/70‑1 GAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTT < 1:1298301/41‑1 TAAACAGGTCCGCCAGATAATCGAACAACCCCAGCGTGACACCAAAGAACGAACTGGCAACAGCTAAGTTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3746841‑3746912‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttagAGAACACCAGCAGGCAAAACTCGATAATGCCGTGCTGTTTGGTGCCGAGGAACGATTTCACCAGCGAATC > W3110S.gb/3748112‑3748181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |