| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 1114187 | 66 (1.870) | 11 (0.360) +TCCCTCA |
3/94 | NT | 23.2% | coding (1748/2544 nt) | mdoH | glucan biosynthesis: glycosyl transferase |
| ? | W3110S.gb | 2403101 = | 18 (0.510) | coding (1741/2733 nt) | nuoG | NADH:ubiquinone oxidoreductase, chain G | |||||
TTGTTCCTGCCGAAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1114171‑1114187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGATAGCAGAAGC > W3110S.gb/2403101‑2403113 ||||||| TTGTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAA < 1:1906988/35‑1 GTTCCTTCCGAAGTTTCCCTCAGGATAGCAGAAGC < 1:1067275/35‑1 GTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAAGC < 1:1230211/35‑1 GTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAAGC > 1:1378894/1‑35 GTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAAGC < 1:1424581/35‑1 GTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAAGC < 1:2356731/35‑1 GTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAAGC < 1:269592/35‑1 GTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAAGC < 1:2807777/35‑1 GTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAAGC < 1:3193724/35‑1 GTTCCTGCCGAAGTTTCCCTCAGGATAGCAGAAGC < 1:886632/35‑1 GTTCCTGCCGAAGTTTCCCTCAGGACAGCAGAAGC < 1:1816759/35‑1 ||||||| TTGTTCCTGCCGAAGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/1114171‑1114187‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGATAGCAGAAGC > W3110S.gb/2403101‑2403113 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |