| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 315707 | NA (NA) | 31 (0.880) | 7/108 | NT | 100% | coding (654/687 nt) | ykgA | predicted DNA‑binding transcriptional regulator |
| ? | W3110S.gb | 576911 = | 0 (0.000) | coding (76/498 nt) | ybcS | predicted lysozyme | |||||
CTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACA > W3110S.gb/315639‑315757 | cTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa < 1:1154947/71‑1 (MQ=32)cTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATa < 1:2674640/71‑1 (MQ=32) aGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAg < 1:54905/71‑1 (MQ=38) gAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTg < 1:869810/70‑1 (MQ=255) gAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTg < 1:1698010/70‑1 (MQ=255) gAAAACAAGAACCTCCCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTg < 1:905864/70‑1 (MQ=255) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGAtaataa > 1:937251/1‑50 (MQ=255) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaa > 1:2513264/1‑50 (MQ=38) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaa > 1:737745/1‑50 (MQ=38) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaa > 1:2962332/1‑50 (MQ=38) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaa > 1:2570387/1‑50 (MQ=38) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaa > 1:2418632/1‑50 (MQ=38) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaa > 1:2335003/1‑50 (MQ=38) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaa > 1:1253601/1‑50 (MQ=38) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaa > 1:1216642/1‑50 (MQ=38) aCAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATaa > 1:1155231/1‑50 (MQ=38) tgtgTCCATATTACGTGGGTAGGATCATAAAGTCCTCTGGTCGTTg < 1:3072184/46‑1 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAg < 1:2374739/59‑1 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAg < 1:2014506/59‑1 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAg < 1:2647870/59‑1 (MQ=255) tatTACGTGGGTAGGATCATAAAGTCCTCGGGGCGTTGTCCACTCTTTTGGCATGTCAg < 1:887216/59‑1 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGt > 1:1337632/1‑37 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:1106708/1‑59 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:1314533/1‑59 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:1206867/1‑59 (MQ=255) ttACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCa > 1:1146386/1‑59 (MQ=255) ggATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca > 1:837534/1‑56 (MQ=255) ggATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTcaca > 1:892220/1‑56 (MQ=255) | CTCAGTCCGGAACAATTTGAAAACAAGAACCTCGCTTAGGCCTGTGTCCATATTACGTGGGTAGGATCATAAAGTCCTCGGGTCGTTGTCCACTCTTTTGGCATGTCAGCATATTCACA > W3110S.gb/315639‑315757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |