| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | W3110S.gb | 3,742,938 | Δ1,336 bp | 100% | insD–insC | insD, insC | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 3742938–3744265 | 3744273 | 9–1336 | 73 [0] | [0] 73 | insD–insC | insD,insC |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3742937 | 0 (0.000) | 64 (1.820) | 29/84 | NT | 100% | intergenic (‑123/+9) | yieE/insD | predicted phosphopantetheinyl transferase/IS2 element protein |
| ? | W3110S.gb | 3744274 = | 0 (0.000) | intergenic (‑100/+21) | insC/yidZ | IS2 element protein/predicted DNA‑binding transcriptional regulator | |||||
ATGGACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3742861‑3742937‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaattggGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAATGGTTTCCCGTAACCAGACG > W3110S.gb/3744274‑3744343 ATGGACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGA < 1:2347342/71‑1ATGGACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGA < 1:1385655/71‑1 TGGACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAA < 1:577820/71‑1 GGACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAA > 1:3767751/1‑71 GGACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAA > 1:772513/1‑71 GACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAAT > 1:569251/1‑71 GACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAAT > 1:2889862/1‑71 GACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAAT > 1:3207052/1‑71 GACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAA < 1:1899762/70‑1 ACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATT < 1:2331230/71‑1 ACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATT > 1:2911809/1‑71 ACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATT > 1:3443485/1‑71 GACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATT < 1:3161653/68‑1 GACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATT < 1:3193361/68‑1 ACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGT > 1:227408/1‑71 ACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGT > 1:1867236/1‑71 AAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGC > 1:684269/1‑71 GCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTT < 1:3037230/71‑1 GCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTT < 1:3430442/71‑1 GCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTT > 1:1795018/1‑71 CGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTT > 1:1749597/1‑71 GGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTT < 1:3015589/70‑1 GCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCA < 1:290187/71‑1 GCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCA < 1:919123/71‑1 GCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCA < 1:3534788/71‑1 GCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCG < 1:3120776/64‑1 CTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTT < 1:947367/67‑1 TAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCA < 1:511545/69‑1 TAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGT < 1:3790338/65‑1 AAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATA > 1:883397/1‑70 AAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGG > 1:3801649/1‑57 AAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGA > 1:865353/1‑71 AAGTTCGATTCAGACAAGCTTATTA‑AACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGAT > 1:1875707/1‑71 TTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTC > 1:1567753/1‑71 TTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTC > 1:3992265/1‑71 TTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTT > 1:509804/1‑60 CGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGG > 1:1780548/1‑71 CGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGG > 1:139195/1‑71 CGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGG > 1:756079/1‑71 CGATTCAGACAACCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGG > 1:1408418/1‑71 GATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGT < 1:1941776/71‑1 GATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGT < 1:3378714/71‑1 GATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGT < 1:2693816/71‑1 CAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTAT < 1:1466635/70‑1 CAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTA > 1:1879705/1‑69 CAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTA > 1:2439683/1‑69 CAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTA > 1:3059603/1‑69 CAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATT > 1:499965/1‑63 CAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGT > 1:2896822/1‑47 CAGACAAGCTTATTACAACTTTTTTACAGTTTATTGTGAAATTGGGT > 1:3165440/1‑47 ACAAGCTTATTACAACTTTTTTACATTTTATTGTGAA < 1:1142957/37‑1 AAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATC > 1:182377/1‑71 AGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATC < 1:3414365/70‑1 GCTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTA > 1:1149860/1‑62 CTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGAC < 1:1195480/71‑1 CTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGA > 1:4046553/1‑70 CTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGA > 1:1756679/1‑70 CTTATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTT < 1:2879972/45‑1 ATTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCA > 1:33440/1‑45 TTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTT < 1:2592690/42‑1 TTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTT < 1:1668176/42‑1 TTACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTT < 1:3678729/42‑1 ACAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTA > 1:3851866/1‑70 CAACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTA > 1:1007964/1‑69 ACTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTT < 1:3095060/37‑1 CTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCA > 1:1557028/1‑38 CTTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCA > 1:1863298/1‑38 TTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGT < 1:2573561/48‑1 TTTTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGT < 1:710412/48‑1 TTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTA > 1:342053/1‑48 TTTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTA > 1:1514530/1‑48 TTTTACATTTTATTGTGAAATT‑GGTCGCGTTTCATA > 1:401333/1‑36 TTTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTT < 1:1916762/70‑1 TTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTT < 1:2995292/70‑1 TTACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTT < 1:1592876/70‑1 ACATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAA < 1:1006950/70‑1 CATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAATG < 1:3760449/71‑1 CATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAATG > 1:1434502/1‑71 CATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAATG > 1:353627/1‑71 CATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAAT > 1:1097749/1‑70 CATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAA < 1:2012907/69‑1 CATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAA < 1:2696027/69‑1 CATTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAA < 1:772877/69‑1 TTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTA < 1:169162/56‑1 TTTTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTA < 1:3289130/56‑1 TTATTGTGAAATTGGGTCGCGTTTCATACGATTCGGT < 1:2406359/37‑1 AAATTGGGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAATGGTTTCCCGTAAC > 1:3999925/1‑71 GGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAATGGTTTCCCGTAACCAGACG < 1:3327424/71‑1 ATGGACAGACTAAAGCGGCTAAAAGTTCGATTCAGACAAGCTTATTACAACTTTTTTACATTTTATTGTGAAATTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3742861‑3742937‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaattggGTCGCGTTTCATACGATTCGGTTATGCCATCGACGCGTAAAGGTTTTTAATGGTTTCCCGTAACCAGACG > W3110S.gb/3744274‑3744343 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |