| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| MC JC | W3110S.gb | 3,750,593 | Δ1,199 bp | 100% | insH | insH | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | W3110S.gb | 3750593–3751791 | 3751791 | 1–1199 | 137 [0] | [0] 136 | insH | insH |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | W3110S.gb | = 3750592 | 0 (0.000) | 95 (2.470) | 39/92 | NT | 100% | intergenic (‑104/‑69) | tnaA/insH | tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent/IS5 element protein |
| ? | W3110S.gb | 3751792 = | 0 (0.000) | intergenic (+151/+116) | insH/tnaC | IS5 element protein/tryptophanase leader peptide | |||||
Only 100 of 137 total aligned reads displayed.
CCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3750523‑3750592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > W3110S.gb/3751792‑3751861 CCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA > 1:1117626/1‑70 CTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGAACCATCATTTACTAAAAC < 1:3609094/71‑1 GTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAC > 1:2883253/1‑69 GTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAC > 1:129963/1‑69 TGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAA > 1:1223997/1‑67 AATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTA < 1:2164523/71‑1 AATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTA < 1:1360876/71‑1 TATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAA > 1:603407/1‑71 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATA < 1:2711876/71‑1 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAAT < 1:3961542/70‑1 TTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAAT > 1:186148/1‑70 TACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATA > 1:1038873/1‑70 TACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAA > 1:72085/1‑63 ACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAA > 1:667703/1‑71 ACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAA > 1:537303/1‑71 CATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC < 1:2628913/71‑1 CTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAAC > 1:3789749/1‑68 TGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAG > 1:1196276/1‑70 TGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA > 1:1913930/1‑69 TGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA > 1:3697528/1‑69 TGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA > 1:3672276/1‑69 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGA < 1:1904183/71‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAG < 1:2323005/70‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA < 1:3039298/69‑1 CTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA < 1:3734821/69‑1 TATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAACCGAGAGA < 1:2979483/70‑1 ATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGA < 1:2333926/65‑1 TACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATG < 1:2015556/70‑1 ACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGA > 1:1522977/1‑65 ACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAC < 1:841893/49‑1 CCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAA > 1:1957911/1‑58 CGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCT > 1:3816058/1‑71 CGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGAC > 1:574927/1‑69 GATTAATTCGCCAGATATATATGCAAGCAGCATCATTTACTAAAACAAGTAAATAAACGAGAGA > 1:3571707/1‑64 GATTAATTCGCCAGATATATATGCAAGCACCATCAATTACTAAAACAAGTAAATAAACGAGAGA > 1:1092617/1‑64 ATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAA > 1:2833106/1‑52 ATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGT < 1:4016790/49‑1 ATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAACAAGT < 1:2685239/49‑1 ATTCGCCAGATATATATGCAAGCACCATCATTTACTAAAAC < 1:927718/41‑1 CCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATA < 1:3853226/45‑1 CCAGATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATA < 1:3302834/45‑1 ATATATATGCAAGCACCATCATTTACTAAAACAAGTAAATA < 1:3261900/41‑1 TATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAA < 1:2330289/68‑1 ATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAAT > 1:2466302/1‑70 ATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAA > 1:2370781/1‑69 ATATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAA > 1:1350941/1‑41 TATATTCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:2595991/60‑1 TATATGCAAGCACCATCATTTACTAAAACATGTAAATAAAC < 1:1247938/41‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATT < 1:2221036/70‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:103819/60‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:3047506/60‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAA < 1:2908939/60‑1 TATATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:323082/59‑1 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA < 1:1018066/70‑1 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGA > 1:2810427/1‑45 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGA > 1:1428036/1‑45 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGA > 1:3383896/1‑45 TATGCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGA > 1:2038944/1‑45 TGCAAGCACCATCATTTACTAAAAGAAGTAAATAAACGAGAGATGACCTTTGCAAAAGTCAAAATTAAGA < 1:2825061/70‑1 GCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATA > 1:1831325/1‑71 GCAAGCACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGAT > 1:1275599/1‑70 CACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGC < 1:2390885/70‑1 CACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGC > 1:2615790/1‑70 CACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGC > 1:3142451/1‑70 ACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCA > 1:1389282/1‑70 ACCATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCA > 1:1413185/1‑70 ACCATCATTTACTAAAACAAGTAAATAAACGAGAGATG < 1:1611821/38‑1 ACCATCATTTACTAAAACAAGTAAATAAACGAGAGATG < 1:2236956/38‑1 CATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATAT < 1:2032936/64‑1 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:3283679/71‑1 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:1807143/71‑1 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAAC > 1:39376/1‑70 ATCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA > 1:3086578/1‑58 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAA < 1:539880/71‑1 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAA < 1:3772906/71‑1 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACA < 1:322627/70‑1 TCATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAACAAACA > 1:1092563/1‑70 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA < 1:131815/70‑1 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:1388486/1‑70 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAA > 1:364970/1‑69 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATA > 1:627583/1‑61 ATTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAA > 1:1824689/1‑55 TTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:149522/41‑1 TTTACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAA < 1:347054/41‑1 TACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATAAAGCAAACAAATAG > 1:2261726/1‑70 TACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAA > 1:2710711/1‑48 TACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAA > 1:2789219/1‑41 TACTAAAACAAGTAAATAAACGAGAGATGACCTTTGAAAAA > 1:3140536/1‑41 ACTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAA > 1:705976/1‑66 CTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGAT < 1:1891148/70‑1 CTAAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGAT < 1:171866/70‑1 AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA > 1:2120045/1‑70 AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA > 1:2646592/1‑70 AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA > 1:1494000/1‑70 AAAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCA > 1:3170929/1‑70 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > 1:2628271/1‑71 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGC < 1:3252637/55‑1 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATA > 1:1889924/1‑51 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:390754/49‑1 AAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGA < 1:1398437/49‑1 CCCTGTGAATATTACATCTGCTATACCGATTAATTCGCCAGATATATATGCAAGCACCATCATTTACTAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > W3110S.gb/3750523‑3750592‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctaaAACAAGTAAATAAACGAGAGATGACCTTTGCAAAAGGCAAAATTAAGATATAGCAAACAAATAGATCACA > W3110S.gb/3751792‑3751861 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |