New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? minE = 31778364 (1.350)18 (0.400)
+GTG		 3/98 NT 29.8% coding (2779/3363 nt) kefA fused mechanosensitive channel proteins
?minE 2196242 = 26 (0.550)coding (218/1368 nt) degQ serine endoprotease, periplasmic

TTATCCGTAGGTCTTGGTTTTGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/317759‑317783
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAGTTTTTTGGT  >  minE/2196242‑2196255
                         |||              
aTATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:1643575/2‑42
aTATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:1672154/2‑42
aTATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:1786640/2‑42
aTATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:2632465/2‑42
 TATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGG   <  1:2049972/40‑1
  ATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:508141/1‑40
  ATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:1239478/1‑40
  ATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:464989/1‑40
  ATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:3410013/1‑40
  ATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:3403164/1‑40
  ATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:3339417/1‑40
  ATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:1978784/1‑40
  ATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:1951607/1‑40
  ATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:1417876/1‑40
  ATCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:1351602/1‑40
   TCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:2619949/1‑39
   TCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:3297001/1‑39
   TCCGTTGGTTTTGGTTTCGGTTGTGAAAAGTTTTTTGGT  >  1:1813509/1‑39
                         |||              
TTATCCGTAGGTCTTGGTTTTGGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  minE/317759‑317783
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAAAGTTTTTTGGT  >  minE/2196242‑2196255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.