| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 215622 | 22 (0.460) | 285 (12.480) +TTTAATATCAGTAAACCGGACATAACC |
25/50 | NT | 94.7% | coding (732/732 nt) | dnaQ | DNA polymerase III epsilon subunit |
| ? | minE | 2705182 = | 44 (0.930) | intergenic (+106/‑1) | damX/dam | hypothetical protein/DNA adenine methylase | |||||
Only 100 of 664 total aligned reads displayed.
ATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATGAGA > minE/215554‑215690 | aTTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATaa > 1:1496309/1‑69 (MQ=255) tGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATaa < 1:61848/67‑1 (MQ=255) tGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAAt > 1:362804/1‑69 (MQ=255) gCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAttt > 1:1148029‑M1/1‑66 (MQ=255) gCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaat < 1:3177932‑M1/69‑7 (MQ=255) gCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaat < 1:914240‑M1/69‑7 (MQ=255) gCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaa < 1:11823‑M1/68‑6 (MQ=255) gCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaa < 1:3271830‑M1/68‑6 (MQ=255) gCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaa < 1:2307874‑M1/68‑6 (MQ=255) gCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaa < 1:2743199‑M1/68‑6 (MQ=255) cTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATaa < 1:1586545/62‑1 (MQ=255) cTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaat > 1:1105449‑M1/1‑62 (MQ=255) tCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCtgt < 1:2342840/69‑1 (MQ=255) cATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAttt < 1:226828‑M1/63‑4 (MQ=255) aTGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatc < 1:1544045‑M1/68‑10 (MQ=255) aaGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagta > 1:2434577‑M1/1‑56 (MQ=255) aaGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaa > 1:559355‑M1/1‑56 (MQ=255) aaGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAttt > 1:1238787‑M1/1‑56 (MQ=255) gCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaa > 1:2688336‑M1/1‑54 (MQ=255) gCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaa < 1:1928729‑M1/68‑15 (MQ=255) ccGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaac > 1:1992378‑M1/1‑52 (MQ=255) cGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccg < 1:1370354‑M1/69‑19 (MQ=255) tctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga < 1:2017545‑M1/69‑21 (MQ=255) tctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga < 1:3116857‑M1/69‑21 (MQ=255) tctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga < 1:965208‑M1/69‑21 (MQ=255) tctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga < 1:817292‑M1/69‑21 (MQ=255) tctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga < 1:1517989‑M1/69‑21 (MQ=255) ctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga > 1:3291116‑M1/1‑48 (MQ=255) ctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga > 1:2542499‑M1/1‑48 (MQ=255) ctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga > 1:3329130‑M1/1‑48 (MQ=255) ctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga > 1:1620761‑M1/1‑48 (MQ=255) ctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga > 1:2858593‑M1/1‑48 (MQ=255) ctcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga > 1:3253921‑M1/1‑48 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggac > 1:1724070‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggac > 1:938318‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggac > 1:767180‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggac > 1:2139847‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggac > 1:492816‑M1/1‑47 (MQ=255) tcGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggac > 1:1738161‑M1/1‑47 (MQ=255) cGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggaca < 1:2089593‑M1/68‑23 (MQ=255) gATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacata > 1:426301‑M1/1‑45 (MQ=255) tCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataa > 1:2929954‑M1/1‑43 (MQ=255) tCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataa > 1:1658596‑M1/1‑43 (MQ=255) tCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacat < 1:280963‑M1/66‑24 (MQ=255) cTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacc > 1:2366729‑M1/1‑42 (MQ=255) cTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataac > 1:3035263‑M1/1‑42 (MQ=255) gTGCAGAAGAAAGGCGGAAGTTGGCTCTGGCGAGCATAAtttaatatcagtaaaccg < 1:2992148‑M1/57‑19 (MQ=255) gCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacc < 1:2888513‑M1/64‑28 (MQ=255) gCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacc < 1:3058810‑M1/64‑28 (MQ=255) gCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacc < 1:272543‑M1/64‑28 (MQ=255) gCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacc < 1:239976‑M1/64‑28 (MQ=255) gCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacc < 1:1000351‑M1/64‑28 (MQ=255) gCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacc < 1:1968562‑M1/64‑28 (MQ=255) cAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacc < 1:1165563‑M1/63‑28 (MQ=255) agaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaa < 1:1671131‑M1/69‑38 (MQ=255) agaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaa < 1:2186430‑M1/69‑38 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaa > 1:221144‑M1/1‑31 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaa < 1:1565827‑M1/69‑39 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacaaaacccatgaagaaa > 1:2766557‑M1/1‑31 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATa > 1:406777/1‑56 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGa > 1:3416594/1‑69 (MQ=255) gaaAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGa > 1:3226434/1‑69 (MQ=255) aaGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaat > 1:462967‑M1/1‑29 (MQ=255) aaGGCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaat > 1:1465271‑M1/1‑29 (MQ=255) gCGGAAGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgc > 1:2837652‑M1/1‑26 (MQ=255) aaGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctt < 1:887802‑M1/69‑48 (MQ=255) aGTTGCCTCTGGCGATCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttt < 1:1257157‑M1/69‑49 (MQ=255) aGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttt > 1:725300‑M1/1‑21 (MQ=255) aGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttt < 1:2578537‑M1/69‑49 (MQ=255) aGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttt > 1:3079899‑M1/1‑21 (MQ=255) aGTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgc > 1:3190763‑M1/1‑21 (MQ=255) gTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctttt > 1:1760847‑M1/1‑20 (MQ=255) gTTGCCTCTGGCGAGCATAAtttaatatcagtaaaccgga < 1:1323902‑M1/40‑21 (MQ=255) tGCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttt > 1:3388419‑M1/1‑18 (MQ=255) tGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCaa > 1:1799070/1‑68 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataaccgatgaagagaaatcgcgcttttt > 1:2059559‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttg < 1:3126768‑M1/69‑53 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttt > 1:3164106‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttt > 1:2956827‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttt > 1:1393441‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttt > 1:1687615‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttt > 1:57467‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctttt > 1:1823930‑M1/1‑17 (MQ=255) gCCTCTGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgctttt > 1:2246000‑M1/1‑17 (MQ=255) ctctGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga < 1:588473‑M1/68‑54 (MQ=255) ctctGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga < 1:657496‑M1/68‑54 (MQ=255) ctctGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga < 1:2658257‑M1/68‑54 (MQ=255) ctctGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga < 1:2947527‑M1/68‑54 (MQ=255) tctGGCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaag < 1:3353809‑M1/69‑56 (MQ=255) gCGAGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttga > 1:142885‑M1/1‑10 (MQ=255) aGCATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcag > 1:1061019‑M1/1‑7 (MQ=255) gCATAAATACCTGTAAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGa < 1:1900808/69‑1 (MQ=255) cATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcaggg > 1:1865310‑M1/1‑5 (MQ=255) cATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaaatgggcaggg > 1:2467584‑M1/1‑5 (MQ=255) cATAAtttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaaatgggcaggg > 1:1417221‑M1/1‑5 (MQ=255) tAAATACCTGTGAAAGGCGCTAAAAATAGCGACtt > 1:1026880/1‑35 (MQ=255) tAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATg > 1:1284744/1‑68 (MQ=255) tAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATg > 1:684963/1‑68 (MQ=255) atttaatatcagtaaaccggacataacccatgaagaaaaatcgcgcttttttgaagtgggcagggggca < 1:2619478‑M1/69‑69 (MQ=255) atttaatatcagtaaaccggacataacccatgaagaaa < 1:83979‑M1/38‑38 (MQ=255) | ATTGCAGCTCATGAAGCCCGTCTCGATCTGGTGCAGAAGAAAGGCGGAAGTTGCCTCTGGCGAGCATAAATACCTGTGAAAGGCGCTAAAAATAGCGACTTGGGCGATTTTTGCAGCAAACGATTCAAAAGATGAGA > minE/215554‑215690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |