| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | = 2053940 | 29 (0.610) | 45 (1.090) +AATCATT |
3/90 | NT | 56.5% | intergenic (+98/+83) | cca/bacA | fused tRNA nucleotidyl transferase and 2'3'‑cyclic phosphodiesterase/2'nucleotidase/phosphatase/undecaprenyl pyrophosphate phosphatase |
| ? | minE | = 2316192 | 51 (1.070) | intergenic (+1/‑134) | glpK/glpX | glycerol kinase/fructose 1,6‑bisphosphatase II | |||||
Only 100 of 122 total aligned reads displayed.
ACCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGTTTATGCCGCATCCGGTAGTCCCGAAACGTGCGGGGGCAACCCCG > minE/2316127‑2316256 | aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:1851393/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa > 1:400322/1‑69 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:1593552/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:1436377/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:3320439/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:3192551/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:3069432/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:565520/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:1829109/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:1158985/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:852884/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa > 1:1148805/1‑69 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:1855286/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa > 1:2058195/1‑69 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:2666088/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:2119803/69‑1 (MQ=255)aCCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:231877/69‑1 (MQ=255) aCGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGc > 1:101841/1‑68 (MQ=255) aCGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGc > 1:14539/1‑68 (MQ=255) gCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCg < 1:511232/68‑1 (MQ=255) gCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCg < 1:2248352/68‑1 (MQ=255) gCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCg < 1:913707/68‑1 (MQ=255) cTGGAAAAAAGGGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:428772/56‑1 (MQ=255) cTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATgca > 1:2520634/1‑67 (MQ=255) cTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGaa > 1:1527475/1‑69 (MQ=255) cTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGaa > 1:521671/1‑69 (MQ=255) gAAAAAAGCGGTCAAACGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgac < 1:2509065‑M2/69‑20 (MQ=255) gAAAAAAGCGGTCAAACGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgac < 1:2661354‑M2/69‑20 (MQ=255) gAAAAAAGCGGTCAAACGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgac < 1:1039767‑M2/69‑20 (MQ=255) gAAAAAAGCGGTCAAACGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgac < 1:2754557‑M2/69‑20 (MQ=255) gAAAAAAGCGGTCAAACGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgac < 1:1998055‑M2/69‑20 (MQ=255) gAAAAAAGCGGTCAAACGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgac < 1:1111567‑M2/69‑20 (MQ=255) gAAAAAAGCGGTCAAACGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgac < 1:686114‑M2/69‑20 (MQ=255) gAAAAAAGCGGTCAAACGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgac < 1:1733121‑M2/69‑20 (MQ=255) gAAAAAAGCGGTCAAACGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgac < 1:1311068‑M2/69‑20 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:486029/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:3057286/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:342234/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:2308456/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2524643/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:3214827/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2530378/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2608624/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2645272/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:3208947/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2655493/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:3120281/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:853991/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2807395/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:3078246/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2934068/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2988868/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:551255/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:781933/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:2365848/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2336938/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:1616157/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2233562/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:1509542/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:2196335/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:1645191/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:1506235/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:1472134/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:1406415/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt > 1:2015855/1‑69 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:1744783/69‑1 (MQ=255) aaaaaGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGtt < 1:1954386/69‑1 (MQ=255) tAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTa < 1:73130/41‑1 (MQ=255) aaCGCGCGATTGCGTGGGAAGAACACGACGAATAATGTa < 1:152771/39‑1 (MQ=255) aCGCGCGATGGCATGGGAAGAACACGATGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:3431201‑M2/1‑35 (MQ=255) aCGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcttcttat > 1:3744‑M2/1‑35 (MQ=255) aCGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:1197676‑M2/1‑35 (MQ=255) aCGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:1258210‑M2/1‑35 (MQ=255) aCGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:1789789‑M2/1‑35 (MQ=255) aCGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:1061513‑M2/1‑35 (MQ=255) aCGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:172837‑M2/1‑35 (MQ=255) aCGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:2034669‑M2/1‑35 (MQ=255) aCGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:2087966‑M2/1‑35 (MQ=255) aCGCGCGATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:2114535‑M2/1‑35 (MQ=255) cgcgcgATGGCGTGGGAAGAACACGACGAATAATGTa < 1:2099689/37‑1 (MQ=255) cgcgcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:1015131‑M2/1‑34 (MQ=255) cgcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:919467‑M2/1‑32 (MQ=255) cgcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:130344‑M2/1‑32 (MQ=255) cgcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:1025624‑M2/1‑32 (MQ=255) cgcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:1696489‑M2/1‑32 (MQ=255) cgcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:3156531‑M2/1‑32 (MQ=255) cgcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:1737154‑M2/1‑32 (MQ=255) gcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:3197549‑M2/1‑31 (MQ=255) gcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:1476526‑M2/1‑31 (MQ=255) gcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:126346‑M2/1‑31 (MQ=255) gcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:3036409‑M2/1‑31 (MQ=255) gcgATGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:238090‑M2/1‑31 (MQ=255) tGGCATGGGAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:1152198‑M2/1‑27 (MQ=255) ggCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGTTTATGCCGCATCCGGTAGTccc > 1:2223753/1‑68 (MQ=255) ggAAGAACACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:3043948‑M2/1‑20 (MQ=255) gaagaaCACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:1631303‑M2/1‑19 (MQ=255) aaCACGACGAGTAATaatgattgcctgatgcgacgcttgcgcgtcttat > 1:3311120‑M2/1‑15 (MQ=255) acgacgAGTAATaatgattgcctgatgcgacgcttgcgcgtcttatcag > 1:1946650‑M2/1‑12 (MQ=255) acgacgAATAATGTAAATGCCGAATGAAGCGTTTATGCCGCATCCGGTAGTCCCGAAACGTGCGGGGGc < 1:2891201/69‑1 (MQ=255) ataatGTAAATGCCGAATGAAGCGTTTATGCCGCATCCGGTAGTCCCGAAACGTGCGGGGGAAACCCCg < 1:384538/69‑1 (MQ=255) | ACCGTTACGCAGGCTGGAAAAAAGCGGTTAAACGCGCGATGGCGTGGGAAGAACACGACGAATAATGTAAATGCCGAATGAAGCGTTTATGCCGCATCCGGTAGTCCCGAAACGTGCGGGGGCAACCCCG > minE/2316127‑2316256 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |