Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 615,142 A→C 42.2% E264A (GAA→GCA)  serC → 3‑phosphoserine/phosphohydroxythreonine aminotransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE615,1420AC42.2% 25.0 / 94.4 90E264A (GAA→GCA) serC3‑phosphoserine/phosphohydroxythreonine aminotransferase
Reads supporting (aligned to +/- strand):  ref base A (16/36);  new base C (11/27);  total (27/63)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.07e-01

TATCTGGTCTGGTCTTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGTGATTGATAACAGCGAT  >  minE/615094‑615203
                                                |                                                             
tatctGGTCTGGTCTTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATg                                                           >  1:201560/1‑53 (MQ=255)
tatctGGTCTGGTCTTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAatcaatca                                             >  1:2363037/1‑67 (MQ=255)
tatctGGTCTGGTCTTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAg                                            >  1:1719596/1‑68 (MQ=255)
tatctGGTCTGGTCTTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAg                                            >  1:2506641/1‑68 (MQ=255)
         tggtctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAg                                  <  1:1382052/69‑1 (MQ=255)
         tggtctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAg                                  <  1:1910901/69‑1 (MQ=255)
         tggtctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAg                                  <  1:1944513/69‑1 (MQ=255)
         tggtctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAg                                  <  1:3359934/69‑1 (MQ=255)
         tggtctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAg                                  <  1:2750113/69‑1 (MQ=255)
         tggtctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAg                                  <  1:2727206/69‑1 (MQ=255)
         tggtctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAg                                  <  1:613084/69‑1 (MQ=255)
         tggtctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAg                                  <  1:710005/69‑1 (MQ=255)
         tggtctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAg                                  <  1:2713493/69‑1 (MQ=255)
         tggtctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAg                                  <  1:2533610/69‑1 (MQ=255)
             ctTTAAATTGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      <  1:727036/45‑1 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACTGCGGTGTAGCTGAAATGGATaa                                                      >  1:498574/1‑45 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      >  1:1093879/1‑45 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      >  1:2472600/1‑45 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      >  1:2509690/1‑45 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      <  1:2229091/45‑1 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      <  1:3118604/45‑1 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      <  1:1131676/45‑1 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      <  1:1633006/45‑1 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      >  1:1228740/1‑45 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      >  1:491419/1‑45 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      <  1:1467780/45‑1 (MQ=255)
             ctTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATaa                                                      <  1:1507892/45‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:3202281/68‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:2585734/68‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:3394545/68‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:3375483/68‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:2632714/68‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:1529405/68‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:3279989/68‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:2027381/68‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:2023596/68‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:3207136/68‑1 (MQ=255)
                  aaTGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:1692041/68‑1 (MQ=255)
                  aaTGGCTGAAAGAGAACGGCGGGGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCta                          <  1:315573/68‑1 (MQ=255)
                      gCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATgg                     >  1:3078506/1‑69 (MQ=255)
                      gCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATgg                     >  1:2911288/1‑69 (MQ=255)
                      gCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATgg                     >  1:3144157/1‑69 (MQ=255)
                      gCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATgg                     >  1:1994033/1‑69 (MQ=255)
                      gCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATgg                     >  1:1067910/1‑69 (MQ=255)
                         gAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCGGAACTGCTATATGGGGt                  <  1:2702281/69‑1 (MQ=255)
                         gAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGt                  <  1:2632136/69‑1 (MQ=255)
                         gAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGt                  <  1:297780/69‑1 (MQ=255)
                         gAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGt                  <  1:3224266/69‑1 (MQ=255)
                         gAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGt                  <  1:1162490/69‑1 (MQ=255)
                         gAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGt                  <  1:2296259/69‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:1169954/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:319995/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:2647785/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:1592440/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:1545554/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:1501116/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:1350975/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:379234/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:453140/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:460258/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:1757322/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:547955/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:622849/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:1136373/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:1104059/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:873791/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:919356/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:2833632/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:2019909/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:3130137/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:2185599/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:2947172/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:2267373/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:2460681/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:3019674/58‑1 (MQ=255)
                           aaGCGAACGGCGGTGTGGCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:1996429/58‑1 (MQ=255)
                                         gtAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGTGATTGATAACAGCGAt  <  1:2706987/69‑1 (MQ=255)
                                         gtAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGTGATTGATAACAGCGAt  >  1:1329035/1‑69 (MQ=255)
                                            gCTGCAATGGATAAGATCAATCGGCAAAAAGCAGAACTGCt                           <  1:2983883/41‑1 (MQ=37)
                                            gCTGCAATGGATAAGATCAATCAGCAAAAAGCAGAACTGCtgt                         >  1:2514159/1‑41 (MQ=37)
                                            gCTGCAATGGATAAGATCAATCAGCAAAAAGCAGAACTGCtgt                         >  1:2489990/1‑41 (MQ=37)
                                            gCTGCAATGGATAAGATCAATCAGCAAAAAGCAGAACTGCtgt                         >  1:2985294/1‑41 (MQ=37)
                                            gCTGCAATGGATAAGATCAATCAGCAAAAAGCAGAACTGCtgt                         >  1:780744/1‑41 (MQ=37)
                                            gCTGCAATGGATAAGATCAATCAGCAAAAAGCAGAACTGCtgt                         >  1:2644190/1‑41 (MQ=37)
                                            gCTGCAATGGATAAGATCAATCAGCAAAAAGCAGAACTGCtgt                         >  1:2269432/1‑41 (MQ=37)
                                            gCTGCAATGGATAAGATCAATCAGCAAAAAGCAGAACTGCtgt                         >  1:429285/1‑41 (MQ=37)
                                            gCTGCAATGGATAAGATCAATCAGCAAAAAGCAGAACTGCtgt                         >  1:3422945/1‑41 (MQ=37)
                                            gCTGCAATGGATAAGATCAATCAGCAAAAAGCAGAACTGCtgt                         >  1:3130839/1‑41 (MQ=37)
                                            gCTGCAATGGATAAGATCAATCAGCAAAAAGCAGAACTGCtgt                         >  1:1833439/1‑41 (MQ=37)
                                            gCTGCAATGGATAAGATCAATAAGCAAAAAGCAGAACTGCtgt                         >  1:1406881/1‑41 (MQ=37)
                                                |                                                             
TATCTGGTCTGGTCTTTAAATGGCTGAAAGCGAACGGCGGTGTAGCTGAAATGGATAAAATCAATCAGCAAAAAGCAGAACTGCTATATGGGGTGATTGATAACAGCGAT  >  minE/615094‑615203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: