| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | minE | 977,516 | G→A | 20.6% | N543N (AAC→AAT) | dcp ← | dipeptidyl carboxypeptidase II |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 977,516 | 0 | G | A | 20.6% | 221.9 / 41.0 | 149 | N543N (AAC→AAT) | dcp | dipeptidyl carboxypeptidase II |
| Reads supporting (aligned to +/- strand): ref base G (80/38); new base A (21/10); total (101/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01 | |||||||||||
Only 100 of 155 total aligned reads displayed.
AATGCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGCTCTGATAAT > minE/977458‑977583 | aaTGCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTATTGAACAgac < 1:1950478/69‑3 (MQ=255)aaTGCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTATTGAACAgac < 1:1519660/69‑3 (MQ=255)aaTGCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTATTGAACAgac < 1:2986757/69‑3 (MQ=255)aaTGCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTATTGAACAgac < 1:2662009/69‑3 (MQ=255)aaTGCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTATTGAACAgac < 1:187559/69‑3 (MQ=255)aaTGCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTATTGAACAgac < 1:3242287/69‑3 (MQ=255)aaTGCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTATTGAACAgac < 1:3354623/69‑3 (MQ=255)aaTGCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTATTGAACAgac < 1:805121/69‑3 (MQ=255) gCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTgg > 1:1984596/1‑69 (MQ=255) gCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTgg > 1:1130025/1‑69 (MQ=255) gCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTgg > 1:3348564/1‑69 (MQ=255) gCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTgg > 1:2137584/1‑69 (MQ=255) gCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTgg > 1:2042102/1‑69 (MQ=255) gCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTgg > 1:3170036/1‑69 (MQ=255) gCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTgg > 1:2654461/1‑69 (MQ=255) gCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTgg > 1:2119284/1‑69 (MQ=255) gCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTgg > 1:566525/1‑69 (MQ=255) gCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTgg > 1:207932/1‑69 (MQ=255) ccAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGc > 1:453015/1‑69 (MQ=255) ccAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGc > 1:1710027/1‑69 (MQ=255) ccAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGc > 1:1476681/1‑69 (MQ=255) ccAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGc > 1:487760/1‑69 (MQ=255) ccAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGc > 1:3150144/1‑69 (MQ=255) ccAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGATGGc > 1:690704/1‑69 (MQ=255) aGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCAt < 1:2983953/69‑1 (MQ=255) aGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCAt < 1:2922640/69‑1 (MQ=255) aGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCAt < 1:2855824/69‑1 (MQ=255) aGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCAt < 1:3400765/69‑1 (MQ=255) aGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCAt < 1:794457/69‑1 (MQ=255) aGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCAt < 1:1267623/69‑1 (MQ=255) aGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCAt < 1:2459495/69‑1 (MQ=255) aGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCAt < 1:1530517/69‑1 (MQ=255) aGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCAt < 1:2334963/69‑1 (MQ=255) aGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCAt < 1:2196852/69‑1 (MQ=255) tatCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCa < 1:1019444/69‑1 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt < 1:3305263/56‑1 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt > 1:3222082/1‑56 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt > 1:2515075/1‑56 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt > 1:335872/1‑56 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt > 1:2516472/1‑56 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt > 1:3092846/1‑56 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt > 1:1026717/1‑56 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt > 1:1806399/1‑56 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt < 1:1349471/56‑1 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt < 1:1549215/56‑1 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt > 1:1602655/1‑56 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt < 1:1598574/56‑1 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCAtt > 1:1359952/1‑69 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCAtt > 1:3068581/1‑69 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCAtt > 1:28339/1‑69 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCAt > 1:410544/1‑68 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCAt > 1:2161474/1‑68 (MQ=255) tCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCAt > 1:1090692/1‑68 (MQ=255) gcggcgCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGaa > 1:1471307/1‑41 (MQ=255) gcggcgCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGc > 1:1173871/1‑57 (MQ=255) gcggcgCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCa > 1:2015705/1‑58 (MQ=255) gcggcgCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCa > 1:2319653/1‑58 (MQ=255) gcggcgCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGc > 1:348859/1‑69 (MQ=255) gcggcgCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGc > 1:1078988/1‑69 (MQ=255) gcggcgCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGc > 1:2914876/1‑69 (MQ=255) gcggcgCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCCGGCATTACGCATTTTCTGTTGc > 1:1577119/1‑69 (MQ=255) aaGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCt < 1:2757077/39‑1 (MQ=255) ttCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCAt < 1:598469/69‑1 (MQ=255) ttCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCAt < 1:2072575/69‑1 (MQ=255) ttCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCAt < 1:3305782/69‑1 (MQ=255) ttCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCAt < 1:1152535/69‑1 (MQ=255) ttCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCAt < 1:444930/69‑1 (MQ=255) cGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAgg > 1:1587677/1‑64 (MQ=255) cGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAgg > 1:1251125/1‑64 (MQ=255) cGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAgg > 1:3237462/1‑64 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTGAGGCATtgc > 1:1060269/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtgc > 1:2295253/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtgc > 1:1101073/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtgc > 1:1336297/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtgc > 1:1255391/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtgc > 1:3201526/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtgc > 1:524421/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtgc > 1:596261/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtgc > 1:2340616/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtgc > 1:1533286/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtgc > 1:2750454/1‑69 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtg > 1:1760342/1‑68 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTCGTCAGGCATtg > 1:1756670/1‑68 (MQ=255) gCTCATCTCATACCCTTTATTGAACAGACTGGCATTACGCATTTTCTGTTGAAGTTAGTCAGGCATtgc > 1:1664437/1‑69 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCATTTCGTCAGGCATTGCTGCCCCGctct > 1:2476270/1‑68 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGctct > 1:2383925/1‑68 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGctct > 1:771326/1‑68 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGctct > 1:753034/1‑68 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGctct > 1:394760/1‑68 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGctct > 1:2690110/1‑68 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGctct > 1:2577732/1‑68 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGctct > 1:1769127/1‑68 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGctct > 1:1070059/1‑68 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGctc > 1:824416/1‑67 (MQ=255) cccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGctat > 1:1101133/1‑66 (MQ=255) ccTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTGGTCAGGCATTGCTGCCCCGCTCTg > 1:1961856/1‑68 (MQ=255) tgttgAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGCTCTGATAAt > 1:2585276/1‑69 (MQ=255) tgttgAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGCTCTGATAAt > 1:65144/1‑69 (MQ=255) tgttgAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGCTCTGATAAt > 1:1544772/1‑69 (MQ=255) gttgAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCAt < 1:3172283/48‑1 (MQ=255) | AATGCCAGCGCATATCGAGAAGTGCGGCGCTAAGCAGTTCGCTCATCTCATACCCTTTGTTGAACAGGCTGGCATTACGCATTTTCTGTTGCAGTTCGTCAGGCATTGCTGCCCCGCTCTGATAAT > minE/977458‑977583 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |