Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 1,126,319 A→C 75.7% G105G (GGT→GGG pheS ← phenylalanine tRNA synthetase, alpha subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE1,126,3190AC75.7% 64.4 / 16.1 41G105G (GGT→GGGpheSphenylalanine tRNA synthetase, alpha subunit
Reads supporting (aligned to +/- strand):  ref base A (3/7);  new base C (20/11);  total (23/18)
Fisher's exact test for biased strand distribution p-value = 7.53e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01

GTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGA  >  minE/1126257‑1126376
                                                              |                                                         
gTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGAccgccg                                                     <  1:321473/69‑1 (MQ=255)
 tAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGAccgccg                                                     <  1:1397440/68‑1 (MQ=255)
     gCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTc                                                <  1:1860737/69‑1 (MQ=255)
      ccAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCa                                               >  1:2132630/1‑69 (MQ=255)
      ccAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCa                                               >  1:3205970/1‑69 (MQ=255)
           cTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGc                                           >  1:2066082/1‑68 (MQ=255)
                cGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGcgacga                                      <  1:2864777/68‑1 (MQ=255)
                                   gTCGATGGTACGGGTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:2194106/68‑1 (MQ=255)
                                   gTCGATGGTACGGGTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:561889/68‑1 (MQ=255)
                                   gTCGATGGTACGGGTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:171666/68‑1 (MQ=255)
                                   gTCGATGGTACGGGTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:75833/68‑1 (MQ=255)
                                   gTCGATGGTACGGGTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:1544558/68‑1 (MQ=255)
                                   gTCGATGGTACGGGTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:1379135/68‑1 (MQ=255)
                                   gTCGATGGTACGGGTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:879628/68‑1 (MQ=255)
                                   gTCGATGGTACGGGTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:1332349/68‑1 (MQ=255)
                                    tCGATGGTACGGGTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:1073963/67‑1 (MQ=255)
                                    tCGATGGTACGGGTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:882632/67‑1 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGCCGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:2966534/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATc                     >  1:731398/1‑55 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGttt             >  1:2339030/1‑63 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:526925/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:3403063/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:3329/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:740394/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:812173/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:2599318/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:2726898/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:2604776/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:2498043/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:2267239/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:1998917/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:1926931/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:1840568/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:1643913/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:1489509/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:1262032/1‑68 (MQ=255)
                                              gggTCACCGGATGCAGCCAGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCAATCGTTTccgcc        >  1:3399510/1‑68 (MQ=255)
                                                 tcaCCGGATGCAGCCCGCCGTTTTCAATGCGACGACCCGGCAGGGAGACATCaa                   <  1:2658158/52‑1 (MQ=255)
                                                   aCCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGa  <  1:3052475/69‑1 (MQ=255)
                                                   aCCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGa  <  1:3216484/69‑1 (MQ=255)
                                                   aCCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGa  <  1:1344406/69‑1 (MQ=255)
                                                              |                                                         
GTAAAGCCAAGCTCACCGAAGAAACTTTCGATACGGTCGATGGTACGGGTAACCGGATGCAGACCGCCGTTTTCAATGCGACGACCTGGCAGAGAGACATCAATCGTTTCCGCCGCCAGA  >  minE/1126257‑1126376

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: