Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 1,257,700 C→A 100% L115M (CTG→ATG)  yecP → predicted methyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE1,257,7000CA81.8% 33.0 / 3.7 22L115M (CTG→ATG) yecPpredicted methyltransferase
Reads supporting (aligned to +/- strand):  ref base C (1/3);  new base A (0/18);  total (1/21)
Fisher's exact test for biased strand distribution p-value = 1.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.22e-01
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

AACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTAT  >  minE/1257655‑1257762
                                             |                                                              
aaCATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAAc                                          >  1:217741/1‑68 (MQ=255)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:296644/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:96582/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:608964/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:506/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:47655/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:469276/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:3394937/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:3005006/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:2833515/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:2691858/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:2646831/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:2526130/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:2426528/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:1796785/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:1752318/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:1713079/40‑1 (MQ=38)
            gAATGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:1482627/40‑1 (MQ=38)
             aaTGGCGTTCCGACTGGAAATGGGATCGCGTTATGcccc                                                          <  1:1148573/39‑1 (MQ=38)
               tGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTg                          <  1:494082/69‑1 (MQ=255)
                                       cGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTAt  <  1:3376310/69‑1 (MQ=255)
                                       cGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTAt  <  1:494254/69‑1 (MQ=255)
                                             |                                                              
AACATCGATACCGAATGGCGTTCCGACTGGAAATGGGATCGTGTTCTGCCCCATCTTTCTGATTTAACCGGACGCACCATTCTGGATGTCGGCTGCGGCAGCGGTTAT  >  minE/1257655‑1257762

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: