| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | minE | 1,616,715 | G→C | 100% | T435T (ACC→ACG) | eutE ← | predicted aldehyde dehydrogenase, ethanolamine utilization protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,616,715 | 0 | G | C | 100.0% | 17.1 / NA | 9 | T435T (ACC→ACG) | eutE | predicted aldehyde dehydrogenase, ethanolamine utilization protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base C (0/9); total (0/9) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TACGCGCGCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATGGTGGTCCAGCCTTCCCCGCCCA > minE/1616669‑1616737 | tccgcgcgCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATCGTGGTCCATCCTTCCCCGccca < 1:2235035/67‑1 (MQ=255)tccgcgcgCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATCGTGGTCCAGCCTTCCCCGccca < 1:1712672/67‑1 (MQ=255)tccgcgcgCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATCGTGGTCCAGCCTTCCCCGccca < 1:2053511/67‑1 (MQ=255)tccgcgcgCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATCGTGGTCCAGCCTTCCCCGccca < 1:2140654/67‑1 (MQ=255)tccgcgcgCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATCGTGGTCCAGCCTTCCCCGccca < 1:3045666/67‑1 (MQ=255)tccgcgcgCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATCGTGGTCCAGCCTTCCCCGccca < 1:633417/67‑1 (MQ=255)tccgcgcgCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATCGTGGTCCAGCCTTCCCCGccca < 1:705105/67‑1 (MQ=255)tccgcgcgCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATCGTGGTCCAGCCTTCCCCGccca < 1:812087/67‑1 (MQ=255)tccgcgcgCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATCGTGGTCCAGCCTTCCCCGccca < 1:908446/67‑1 (MQ=255) | TACGCGCGCTGGTTACCCCTTCACCGGTTGGCGTGGTGATGGTCATGGTGGTCCAGCCTTCCCCGCCCA > minE/1616669‑1616737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |