| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | minE | 1,616,754 | G→A | 100% | C422C (TGC→TGT) | eutE ← | predicted aldehyde dehydrogenase, ethanolamine utilization protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,616,754 | 0 | G | A | 100.0% | 42.3 / NA | 19 | C422C (TGC→TGT) | eutE | predicted aldehyde dehydrogenase, ethanolamine utilization protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (0/19); total (0/19) | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
GGCAATGCACGGTCCGTTCTTAACGAAAATGCTGGTATCAATAGCATTCGCCATCTGGTTCATGTTTTC > minE/1616748‑1616816 | ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:2747132/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:878893/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:874901/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:741729/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:478095/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:3383692/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:312068/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:3112939/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:2938884/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:2802984/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:1024550/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:2723742/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:2704950/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:2674300/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:261553/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:2452537/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:2098252/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:1771798/69‑1 (MQ=255)ggCAATACACGGTCCGTTCTTAACGAAAATGCTGGTATCAATGGCGTTCGCCATCTGGTTCATGTTTTc < 1:1362839/69‑1 (MQ=255) | GGCAATGCACGGTCCGTTCTTAACGAAAATGCTGGTATCAATAGCATTCGCCATCTGGTTCATGTTTTC > minE/1616748‑1616816 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |