| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | minE | 1,922,014 | T→C | 47.5% | V346V (GTA→GTG) | aas ← | fused 2‑acylglycerophospho‑ethanolamine acyl transferase and acyl‑acyl carrier protein synthetase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 1,922,014 | 0 | T | C | 47.5% | 0.9 / 70.9 | 80 | V346V (GTA→GTG) | aas | fused 2‑acylglycerophospho‑ethanolamine acyl transferase and acyl‑acyl carrier protein synthetase |
| Reads supporting (aligned to +/- strand): ref base T (17/25); new base C (18/20); total (35/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.53e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCTTCTTCCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGCACCTGAGTAAGTTG > minE/1921952‑1922082 | tcttctTCCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTg > 1:961611/1‑69 (MQ=255)tcttctTCCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTg > 1:2090620/1‑69 (MQ=255)tcttctTCCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTg > 1:240643/1‑69 (MQ=255)tcttctTCCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTg > 1:2571451/1‑69 (MQ=255)tcttctTCCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTg > 1:3062783/1‑69 (MQ=255) tcCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGc < 1:2265824/68‑1 (MQ=255) tcCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGc < 1:1966150/68‑1 (MQ=255) tcCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGc < 1:196201/68‑1 (MQ=255) tcCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGc < 1:1944222/68‑1 (MQ=255) tcCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGc < 1:1738195/68‑1 (MQ=255) tcCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGc < 1:951128/68‑1 (MQ=255) tcCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGc < 1:1131145/68‑1 (MQ=255) tcCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGc < 1:1167873/68‑1 (MQ=255) ggCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAg < 1:322878/67‑1 (MQ=255) ggCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAg < 1:2033239/67‑1 (MQ=255) ggCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAg < 1:3007996/67‑1 (MQ=255) ggCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAg < 1:516344/67‑1 (MQ=255) tgctgTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAgtggtg < 1:2605232/69‑1 (MQ=255) tgctgTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAgtggtg < 1:2780019/69‑1 (MQ=255) tgctgTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAgtggtg < 1:2863826/69‑1 (MQ=255) gTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGAc < 1:1833121/67‑1 (MQ=255) gTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGAc < 1:1709060/67‑1 (MQ=255) gTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGAc < 1:3021060/67‑1 (MQ=255) gTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGAc < 1:2346460/67‑1 (MQ=255) gTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCCGCAGTGGTGAc < 1:1572367/67‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:2790984/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:3387402/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:3123314/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:3394646/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:2438258/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:54234/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:2996680/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:2340278/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:1113880/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:1519917/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:1125812/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:2148382/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:2001319/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:1851864/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:16282/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:1775732/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:1370503/68‑1 (MQ=255) tgtgCCAGACGCGGCATCAGCAAATGAGCCAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:3325842/68‑1 (MQ=255) gCCAGACGCGGCATCAGCAAATGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:3169962/65‑1 (MQ=255) aTCAGCAAATGAGCGAAGATCCATACTTTGTCGGc < 1:1897852/35‑1 (MQ=255) aGCAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGa > 1:1617894/1‑67 (MQ=255) aGCAAATGAGCGAAGATACATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGa > 1:2765630/1‑67 (MQ=255) cAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGAccc < 1:1196408/68‑1 (MQ=255) cAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCa > 1:3428748/1‑69 (MQ=255) cAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCa > 1:53961/1‑69 (MQ=255) cAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCa > 1:113624/1‑69 (MQ=255) cAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCa > 1:584864/1‑69 (MQ=255) cAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCa > 1:3011397/1‑69 (MQ=255) cAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCa > 1:779047/1‑69 (MQ=255) cAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCa > 1:3143385/1‑69 (MQ=255) cAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCa > 1:2268473/1‑69 (MQ=255) cAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTT‑‑AGATAGACCCAg > 1:1271105/1‑68 (MQ=255) cAAATGAGCGAAGATCAATACTTTGTCGGCAgaggt > 1:1400882/1‑36 (MQ=37) aaTGAGCGAAAATCCACACTTTGTCGGCAGTGGTGACATCTGCttt < 1:446937/46‑1 (MQ=255) gAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGCa < 1:110576/69‑1 (MQ=255) gAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGCa < 1:3280989/69‑1 (MQ=255) gAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGCa < 1:2348710/69‑1 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATa > 1:1730825/3‑52 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACGTGa > 1:1452889/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTgg > 1:2445521/3‑67 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTg > 1:2976559/3‑67 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:2249970/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:3104221/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:2177908/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:1850403/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:2822494/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:477005/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:2909605/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:2915560/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:2978279/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:3250185/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:3245813/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:1592098/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:3027424/3‑68 (MQ=255) aaaTCCACACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGTACCTGa > 1:3054269/3‑68 (MQ=255) tACTTTGTCGGCAGTGGTGACATCTGCTTTTGAATCTTCCAGATAGACCCAGCGCACCTGAGTAAGTTg > 1:1786459/1‑69 (MQ=255) tACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGCACCTGAGTAAGTTg > 1:2892896/1‑69 (MQ=255) | TCTTCTTCCGGCTGCTGTTTAACCTGTGCCAGACGCGGCATCAGCAAATGAGCGAAGATCCATACTTTGTCGGCAGTGGTGACATCTGCTTTTAAATCTTCCAGATAGACCCAGCGCACCTGAGTAAGTTG > minE/1921952‑1922082 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |