| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | minE | 2,156,632 | A→G | 71.2% | N72N (AAT→AAC) | obgE ← | GTPase involved in cell partioning and DNA repair |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 2,156,632 | 0 | A | G | 71.2% | 78.3 / 32.0 | 76 | N72N (AAT→AAC) | obgE | GTPase involved in cell partioning and DNA repair |
| Reads supporting (aligned to +/- strand): ref base A (4/18); new base G (10/44); total (14/62) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGCACTTTAATCGTCACGTCTTTACCGCGCTTACCGGTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGATAAGCGTG > minE/2156576‑2156686 | ggCACTTTAATCGTCACGTCTTTACCGCGCTTACCGGTACAGTCGCGGCTTGCGCCATTCTGACcgcg < 1:462197/68‑1 (MQ=255) aCGTCTTTACCGCGCTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGAt > 1:2566396/1‑69 (MQ=255) aCGTCTTTACCGCGCTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGAt > 1:3376024/1‑69 (MQ=255) aCGTCTTTACCGCGCTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGAt > 1:2378122/1‑69 (MQ=255) aCGTCTTTACCGCGCTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGAt > 1:1876314/1‑69 (MQ=255) aCGTCTTTACCGCGCTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGAt > 1:3195900/1‑69 (MQ=255) aCGTCTTTACCGCGCTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGAt > 1:681309/1‑69 (MQ=255) aCGTCTTTACCGCGCTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGAt > 1:2933592/1‑69 (MQ=255) aCGTCTTTACCGCGCTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGAt > 1:834479/1‑69 (MQ=255) aCGTCTTTACCGCGCTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGAt > 1:1325927/1‑69 (MQ=255) aCGTCTTTACCGCGCTTACCGGTACAGTCTAGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGAt > 1:2150443/1‑69 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCTCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:468834/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:287199/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:2841064/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:3066834/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:3285618/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:2956248/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:3304085/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:2408350/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:2386232/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:299117/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:3363124/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:3123098/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:3413873/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:2171045/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:872315/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:2062348/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:453127/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:857380/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:531082/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:85667/69‑1 (MQ=255) cgcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGa < 1:1716074/69‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGAGCGCGCTCTGCACGGa < 1:529021/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:907398/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:807703/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:766222/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:3136117/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:635810/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:3242669/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:576003/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:3346998/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:418049/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:3430808/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:2995929/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:1175521/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:2004016/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:2051852/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:2118457/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:2362669/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:2468055/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:2468964/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:2679223/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTACACGGa < 1:1640716/51‑1 (MQ=255) gcTTACCGGTACAGTCTCGGCTTGCACAGTTCTGACCGCGCTCTGCACGGa < 1:777451/51‑1 (MQ=255) cTTACCGGTACAGTCTCGGCTTGCACCGTTCTGACCGCGCTCTGCACGGa < 1:1572463/50‑1 (MQ=255) ggTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGa < 1:3337216/68‑1 (MQ=255) ggTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGa < 1:168127/68‑1 (MQ=255) ggTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGa < 1:1788567/68‑1 (MQ=255) ggTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGa < 1:1797808/68‑1 (MQ=255) ggTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGa < 1:1801780/68‑1 (MQ=255) ggTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGa < 1:1881706/68‑1 (MQ=255) ggTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGa < 1:2766193/68‑1 (MQ=255) ggTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGa < 1:2050122/68‑1 (MQ=255) ggTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGa < 1:353625/68‑1 (MQ=255) tACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGa < 1:2370680/66‑1 (MQ=255) cAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAAc < 1:1836803/55‑1 (MQ=255) cAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAAc < 1:669564/55‑1 (MQ=255) cAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAAc < 1:2140309/55‑1 (MQ=255) cAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAAc < 1:2160614/55‑1 (MQ=255) cAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAAc < 1:2433504/55‑1 (MQ=255) cAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAAc < 1:3120594/55‑1 (MQ=255) aGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAAc < 1:1368742/54‑1 (MQ=255) gcgGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGATAAGCgtg > 1:2713830/1‑67 (MQ=255) gcgGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGATAAGCgtg > 1:411519/1‑67 (MQ=255) gcgGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGATAAGCgtg > 1:1210869/1‑67 (MQ=255) gcgGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGATAAGCgtg > 1:117145/1‑67 (MQ=255) | GGCACTTTAATCGTCACGTCTTTACCGCGCTTACCGGTACAGTCGCGGCTTGCGCCATTCTGACCGCGCTCTGCACGGAAAGATTTTTCAAAACGATAATCGATAAGCGTG > minE/2156576‑2156686 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |