Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 2,464,552 T→C 100% G70G (GGT→GGC atpB → F0 sector of membrane‑bound ATP synthase, subunit a

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE2,464,5520TC75.2% 88.9 / 22.6 72G70G (GGT→GGCatpBF0 sector of membrane‑bound ATP synthase, subunit a
Reads supporting (aligned to +/- strand):  ref base T (1/17);  new base C (6/48);  total (7/65)
Fisher's exact test for biased strand distribution p-value = 6.72e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

GGTGGTGCTGGGTCTGTTGTTCCTGGTTTTATTCCGTAGCGTAGCCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTAATGGTAGCGTGAAAGAC  >  minE/2464489‑2464618
                                                               |                                                                  
ggtggtGCTGGGTCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGcc                                                               >  1:1951186/1‑69 (MQ=255)
ggtggtGCTGGGTCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGcc                                                               >  1:2913635/1‑69 (MQ=255)
ggtggtGCTGGGTCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGcc                                                               >  1:1051871/1‑69 (MQ=255)
ggtggtGCTGGGTCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGcc                                                               >  1:1236865/1‑69 (MQ=255)
ggtggtGCTGGGTCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGcc                                                               >  1:912934/1‑69 (MQ=255)
ggtggtGCTGGGTCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGCCGTGcc                                                               >  1:2631172/1‑69 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:465947/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:19419/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:2039268/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:2251824/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:2307074/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:2380945/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:2586080/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:3308366/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:2821417/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:417408/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:3137957/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGTGTAGCCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGttt                                                     <  1:689547/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGCGTAGCCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGttt                                                     <  1:1142123/67‑1 (MQ=255)
            tCTGTTGTTCCTGGTTTTATTCCGTAGCGTAGCCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGttt                                                     <  1:71188/67‑1 (MQ=255)
                    tCCTGGTTTTATTCCGTAGCGTAGCCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACcgcg                                            <  1:3401413/68‑1 (MQ=255)
                    tCCTGGTTTTATTCCGTAGCGTAGCCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACcgcg                                            <  1:1633615/68‑1 (MQ=255)
                            ttATTCCGTAGCGTAGCCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTg                                   >  1:1884471/1‑69 (MQ=255)
                                     agcgtagcCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGc                          <  1:2626123/69‑1 (MQ=255)
                                     agcgtagcCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGc                          <  1:402823/69‑1 (MQ=255)
                                        gtagcCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:1591593/69‑1 (MQ=255)
                                        gtagcCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:3308337/69‑1 (MQ=255)
                                        gtagcCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:589068/69‑1 (MQ=255)
                                        gtagcCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:2742253/69‑1 (MQ=255)
                                        gtagcCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:3281415/69‑1 (MQ=255)
                                        gtagcCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:909482/69‑1 (MQ=255)
                                        gtagcCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:452975/69‑1 (MQ=255)
                                        gtagcCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:2898666/69‑1 (MQ=255)
                                        gtagcCAAAAAGGCAACCAGCGGCGTGCCAGGCAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:803635/69‑1 (MQ=255)
                                        gtagcCAAAAAGGCAACAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:3133564/68‑1 (MQ=255)
                                        gaagcCAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCttt                       <  1:3192376/67‑1 (MQ=255)
                                           gcCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGtt                    <  1:1918205/69‑1 (MQ=255)
                                           gcCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGtt                    <  1:1157046/69‑1 (MQ=255)
                                           gcCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGtt                    <  1:463072/69‑1 (MQ=255)
                                           gcCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGtt                    <  1:2693911/69‑1 (MQ=255)
                                           gcCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGtt                    <  1:3273290/69‑1 (MQ=255)
                                           gcCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGtt                    <  1:2135086/69‑1 (MQ=255)
                                           gcCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGtt                    <  1:1850019/69‑1 (MQ=255)
                                           gcCAAAAAGGCGACCAGCGGTGGGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGtt                    <  1:3318990/69‑1 (MQ=255)
                                            ccAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGtt                    <  1:1087085/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:377234/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:621347/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:780850/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:898740/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:3360069/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:950881/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:2865399/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:3138731/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:1075419/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:1304150/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:1381379/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:1419551/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:1525201/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:1555423/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:2738739/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:274505/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:2746573/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:2942948/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:2946167/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:2974260/68‑1 (MQ=255)
                                             cAAAAAGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:3283693/68‑1 (MQ=255)
                                              aaaaaGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:1650167/67‑1 (MQ=255)
                                               aaaaGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:2850663/66‑1 (MQ=255)
                                                 aaGGCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:802090/64‑1 (MQ=255)
                                                   ggCAACCAGCGGCGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTa                   <  1:1286539/62‑1 (MQ=255)
                                                             ggTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTAATGGTAGCGTGAAAGAc  <  1:1713093/69‑1 (MQ=255)
                                                             ggTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTAATGGTAGCGTGAAAGAc  <  1:877557/69‑1 (MQ=255)
                                                               |                                                                  
GGTGGTGCTGGGTCTGTTGTTCCTGGTTTTATTCCGTAGCGTAGCCAAAAAGGCGACCAGCGGTGTGCCAGGTAAGTTTCAGACCGCGATTGAGCTGGTGATCGGCTTTGTTAATGGTAGCGTGAAAGAC  >  minE/2464489‑2464618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: