Predicted mutation
evidence seq id position mutation freq annotation gene description
RA minE 2,616,025 G→A 100% A190A (GCG→GCA yhhS → predicted transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*minE2,616,0250GA83.5% 13.8 / ‑2.7 12A190A (GCG→GCAyhhSpredicted transporter
Reads supporting (aligned to +/- strand):  ref base G (2/0);  new base A (10/0);  total (12/0)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

GTTTTATCACTGGGGCGGCTTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCGCTGGTGGCCATTTTGTTGGCGATCCCGCGTCCGACGGTAAAA  >  minE/2615971‑2616067
                                                      |                                          
gtTTTATCACTGGGGCGGATTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCACTGGTGGCCAtttt                              >  1:1027300/1‑69 (MQ=255)
gtTTTATCACTGGGGCGGATTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCACTGGTGGCCAtttt                              >  1:1507108/1‑69 (MQ=255)
gtTTTATCACTGGGGCGGATTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCACTGGTGGCCAtttt                              >  1:2255340/1‑69 (MQ=255)
gtTTTATCACTGGGGCGGATTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCACTGGTGGCCAtttt                              >  1:2288668/1‑69 (MQ=255)
gtTTTATCACTGGGGCGGATTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCACTGGTGGCCAtttt                              >  1:2907890/1‑69 (MQ=255)
gtTTTATCACTGGGGCGGATTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCACTGGTGGCCAtttt                              >  1:2915350/1‑69 (MQ=255)
gtTTTATCACTGGGGCGGATTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCACTGGTGGCCAtttt                              >  1:3135402/1‑69 (MQ=255)
gtTTTATCACTGGGGCGGATTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCACTGGTGGCCAtttt                              >  1:3207889/1‑69 (MQ=255)
gtTTTATCACTGGGGCGGATTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCACTGGTGGCCAtttt                              >  1:3428616/1‑69 (MQ=255)
gtTTTATCACTGGGGCGGATTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCACTGGTGGCCAtttt                              >  1:543036/1‑69 (MQ=255)
             ggcggcTTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCGCTGGTGGCCATTTTGTTGGCGATCCcg                 >  1:3293462/1‑69 (MQ=255)
                              agcgttaATCATTATGGGCGTGGCGCTGGTGGCCATTTTGTTGGCGATCCCGCGTCCGACGGTaaaa  >  1:2515752/1‑67 (MQ=255)
                                                      |                                          
GTTTTATCACTGGGGCGGCTTGCAGGCGTTAGCGTTAATCATTATGGGCGTGGCGCTGGTGGCCATTTTGTTGGCGATCCCGCGTCCGACGGTAAAA  >  minE/2615971‑2616067

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: