| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | minE | 577,885 | T→A | 48.0% | I280I (ATT→ATA) | macB → | fused macrolide transporter subunits and ATP‑binding component and membrane component of ABC superfamily |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | minE | 577,885 | 0 | T | A | 48.0% | 0.0 / 57.4 | 50 | I280I (ATT→ATA) | macB | fused macrolide transporter subunits and ATP‑binding component and membrane component of ABC superfamily |
| Reads supporting (aligned to +/- strand): ref base T (9/17); new base A (7/17); total (16/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.03e-01 | |||||||||||
GACGATGGCATGGCGGGCGCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCGTGGTGGGTGACGCCGCCAAACA > minE/577819‑577938 | gACGATGGGATGGCGGGCGCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATtattat < 1:129933/69‑1 (MQ=255)gACGATGGCATGGCGGGCGCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATtattat < 1:1751625/69‑1 (MQ=255) atggcGGGCGCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGc < 1:1323664/69‑1 (MQ=255) ggcgCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCggt < 1:896416/69‑1 (MQ=255) ggcgCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCggt < 1:2932724/69‑1 (MQ=255) ggcgCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCggt < 1:2094643/69‑1 (MQ=255) ggcgCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCggt < 1:2957719/69‑1 (MQ=255) ggcgCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCggt < 1:3098138/69‑1 (MQ=255) ggcgCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCggt < 1:3177726/69‑1 (MQ=255) ggcgCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCggt < 1:1601675/69‑1 (MQ=255) cgcTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCggtgg > 1:1442721/1‑69 (MQ=255) ggCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTc < 1:642795/69‑1 (MQ=255) ggCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTc < 1:808503/69‑1 (MQ=255) ggCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTc < 1:261374/69‑1 (MQ=255) ggCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTc < 1:2525838/69‑1 (MQ=255) aaTAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTc > 1:2444572/1‑69 (MQ=255) aaTAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTACATTGTc > 1:3337886/1‑69 (MQ=255) aaTAAAATGCGTACTTTACTGACCATGCTGGGGATTATAATCgg > 1:3004449/1‑44 (MQ=255) aaTAAAATGCGTACTTTACTGACCATGCTGGGGATTATAATCgg > 1:2110700/1‑44 (MQ=255) aaTAAAATGCGTACTTTACTGACCATGCTGGGGATTATAATCgg > 1:2192019/1‑44 (MQ=255) aaTAAAATGCGTACTTTACTGACCATGCTGGGGATTATAATCgg > 1:265051/1‑44 (MQ=255) aaTAAAATGCGTACTTTACTGACCATGCTGGGGATTATAATCgg > 1:2239839/1‑44 (MQ=255) aaTAAAATGCGTACTTTACTGACCATGCTGGGGATTATAATCgg > 1:2508178/1‑44 (MQ=255) aaTAAAATGCGTACTTTACTGACAATGCTGGGGATTATAATCgg > 1:640216/1‑44 (MQ=38) aTAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCg > 1:360717/1‑69 (MQ=255) aTAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCg > 1:954744/1‑69 (MQ=255) aTAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCg > 1:2414382/1‑69 (MQ=255) aTAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCg > 1:222601/1‑69 (MQ=255) aTAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCg > 1:1792908/1‑69 (MQ=255) aaaaTGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCgtg < 1:3182731/69‑1 (MQ=255) aaaaTGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCgtg < 1:1499048/69‑1 (MQ=255) aaaaTGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCgtg < 1:2020100/69‑1 (MQ=255) gCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCGtggtgg > 1:2989175/1‑68 (MQ=255) cATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCGTGGTGGGTGACGCCGCcaaaca < 1:210/69‑1 (MQ=255) aTGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCGTGGTGGGTGACGCCGCcaaaca < 1:1685828/68‑1 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:1412557/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:1053907/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:778569/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:733398/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:708562/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:1329413/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:1395814/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:468388/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:2620143/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:3225983/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:3156196/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:2683996/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:3003865/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGTCCGTGGTTTCCATTGTCGTggtgggc < 1:2476200/52‑2 (MQ=255) gCTGGGGATTATAATCGGTATTGCGGCGGTGGTTTCCATTGTCGTggtgggc < 1:1005433/52‑2 (MQ=255) cTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:1980843/51‑2 (MQ=255) cTGGGGATTATAATCGGTATTGCGTCGGTGGTTTCCATTGTCGTggtgggc < 1:1270155/51‑2 (MQ=255) | GACGATGGCATGGCGGGCGCTGGCAGCGAATAAAATGCGTACTTTACTGACCATGCTGGGGATTATTATCGGTATTGCGTCGGTGGTTTCCATTGTCGTGGTGGGTGACGCCGCCAAACA > minE/577819‑577938 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |