| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 969433 = | 120 (1.580) | 3 (0.040) | 3/88 | NT | 2.8% | intergenic (‑17/‑232) | ydeW/ego | predicted DNA‑binding transcriptional regulator/fused AI2 transporter subunits and ATP‑binding components of ABC superfamily |
| ? | minE | 969466 = | 103 (1.540) | intergenic (‑50/‑199) | ydeW/ego | predicted DNA‑binding transcriptional regulator/fused AI2 transporter subunits and ATP‑binding components of ABC superfamily | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AACTGTGGTTGCCATCACAGATATAAATGAGCAAGAACTGAACAATTGCATTAAAGATTTAAATATGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/969503‑969433‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttcaGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCATGAACAAACGCAACCGT > minE/969466‑969534 AACTGTGGTTGCCATCACAGATATAAATGAGCAAGAACTGAACAATTGCATTAAAGATTTAAATATGTTCA < 1:3060421/71‑1AACTGTGGTTGCCATCACAGATATAAATGAGCAAGAACTGAACAATTGCATTAAAGATTTAAATATGTTCA < 1:1635486/71‑1 CTGTGGTTGCCATCACAGATATAAATGAGCAAGAACTGAACAATTGCATTAAAGATTTAAATATGTTCA > 1:1934493/1‑69 ACAGATATAAATGAGCAAGAACTGAACAATTGCATTAAAGATTTAAATATGTTCA < 1:2081111/55‑1 ACAGATATAAATGAGCAAGAACTGAACAATTGCATTAAAGATTTAAATAT > 1:182622/1‑50 TGAGCAAGAACTGAACAATTGCATTAAAGATTTAAATATG > 1:2551519/1‑40 AAGAACTGAACAATTGCATTAAAGATTTAAATATGTTCAGTTCTTGCTCATTTATATCTGTGA < 1:2314012/63‑1 GAACTGAACAATTGCATTAAAGATTTAAATATGTTCAGTTCTTGCTCATTTATATCTGTGATG > 1:283181/1‑63 CAATTGCATTAAAGATTTAAATATGTTCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGT > 1:806779/1‑66 TGTTCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCATGAACAAACGCAA > 1:1344439/1‑71 GTTCAGTTCTTGCTCATTTATATCTGTGATGGCAACGACAGTTTGACTCTACGAGCA > 1:474585/1‑57 GTTCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCATGAACAAACGCAAC > 1:989932/1‑71 GTTCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCATGAACAAACGCAAC > 1:1255082/1‑71 GTTCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCATGAACAAACGCAA < 1:769393/70‑1 GTTCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCATGAACAAA > 1:2594604/1‑65 GTTCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTA > 1:4665896/1‑51 GTTCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTT > 1:1495538/1‑43 GTTCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTT > 1:1080855/1‑43 TTCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCATGAACAAACGCAACC < 1:4674374/71‑1 TCAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTAC < 1:779603/50‑1 CAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCA > 1:1968094/1‑54 CAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCA > 1:468136/1‑54 CAGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGA > 1:1350443/1‑43 AGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCATGAACAAACGCAACCGT > 1:2384416/1‑70 AACTGTGGTTGCCATCACAGATATAAATGAGCAAGAACTGAACAATTGCATTAAAGATTTAAATATGTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/969503‑969433‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgttcaGTTCTTGCTCATTTATATCTGTGATGGCAACCACAGTTTGACTCTACGAGCATGAACAAACGCAACCGT > minE/969466‑969534 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |