| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | minE | 1275138 = | 79 (1.040) | 3 (0.050) | 3/86 | NT | 3.5% | coding (449/647 nt) | yodA | conserved metal‑binding protein |
| ? | minE | 1275253 = | 97 (1.480) | coding (564/647 nt) | yodA | conserved metal‑binding protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATGAGATGATTTTCGTGGTGCAATTATATGATCGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGATCTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1275213‑1275138‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctttaTTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAGGA > minE/1275253‑1275320 ATGAGATGATTTTCGTGGTGCAATTATATGATCGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGA < 1:2331523/70‑1 TGAGATGATTTTCGTGGTGCAATTATATGATCGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGATC < 1:3220444/71‑1 AGATGATTTTCGTGGTGCAATTATATGATCGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGATCTT > 1:590939/1‑71 GATGATTTTCGTGGTGCAATTATATGATCGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGATCTT > 1:176170/1‑70 ATGATTTTCGTGGTGCAATTATATGTTGGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGTTCT < 1:2722956/68‑1 ATGATTTTCGTGGTGCAATTATATGATCGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGATCTTTA < 1:2962206/71‑1 ATGATTTTCGTGGTGCAATTATATGATCGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGATCTTT < 1:1970291/70‑1 ATATGATCGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGATCT > 1:3914626/1‑48 TCGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGAT > 1:2434301/1‑40 CTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGATCTT < 1:2316756/40‑1 AATTGTATATATTTAGGGGCTTTGCTTTCAGGATCTTTATTAAATGAAATGGAAAACTGGCCAACGTAT < 1:2895812/69‑1 TAGGGGCTTTGCTTTCAGGATCTTTACTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTT > 1:3935097/1‑70 GGGCTTTGCTTTCAGGATCTTTATTAAATGAAATGGAAAACTGGCCAACGTATTAT < 1:1313540/56‑1 TCTTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTta < 1:3487780/52‑3 TCTTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAA < 1:4335869/63‑1 TCTTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAG < 1:4600273/61‑1 TCTTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATAT < 1:451129/45‑1 TCTTTATTAAATGAAATGGAAAACTGGCCAACGTAT < 1:313469/36‑1 CTTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAG > 1:3170873/1‑71 CTTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAG > 1:2418875/1‑71 CTTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTA > 1:334405/1‑54 TTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAG > 1:854874/1‑70 TTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAG > 1:1759688/1‑70 TTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAG > 1:849357/1‑70 TTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAG > 1:4017856/1‑70 TTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAG > 1:490395/1‑46 TTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAG > 1:484850/1‑46 TTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATC < 1:40880/44‑1 TTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCA > 1:3954626/1‑40 TTTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCA > 1:3174712/1‑40 TTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAA > 1:3040137/1‑60 TTATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAA > 1:898131/1‑60 TATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGA < 1:1537408/58‑1 TATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAG > 1:1206724/1‑49 ATTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAGGA < 1:4463113/69‑1 ATGAGATGATTTTCGTGGTGCAATTATATGATCGCTAAATTGTATATATTTAGGGGCTTTGCTTTCAGGATCTTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < minE/1275213‑1275138‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atctttaTTAAATGAAATGGAAAACTGGCCAACGTATTATCCATATCAGTTGAGTAGCGAAGAAGTGGTCGAGGA > minE/1275253‑1275320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |